Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8570 | 25933;25934;25935 | chr2:178715706;178715705;178715704 | chr2:179580433;179580432;179580431 |
N2AB | 8253 | 24982;24983;24984 | chr2:178715706;178715705;178715704 | chr2:179580433;179580432;179580431 |
N2A | 7326 | 22201;22202;22203 | chr2:178715706;178715705;178715704 | chr2:179580433;179580432;179580431 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs552462622 | -0.253 | 0.883 | N | 0.487 | 0.404 | None | gnomAD-2.1.1 | 4.12E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.08E-05 | 8.26E-05 | 0 |
E/K | rs552462622 | -0.253 | 0.883 | N | 0.487 | 0.404 | None | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.02938E-04 | 0 | 0 |
E/K | rs552462622 | -0.253 | 0.883 | N | 0.487 | 0.404 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs552462622 | -0.253 | 0.883 | N | 0.487 | 0.404 | None | gnomAD-4.0.0 | 1.44985E-04 | None | None | None | None | N | None | 5.33732E-05 | 0 | None | 0 | 0 | None | 4.71313E-05 | 0 | 1.9045E-04 | 0 | 3.21399E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2397 | likely_benign | 0.2249 | benign | -0.755 | Destabilizing | 0.804 | D | 0.553 | neutral | N | 0.489708936 | None | None | N |
E/C | 0.9333 | likely_pathogenic | 0.9328 | pathogenic | -0.526 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/D | 0.232 | likely_benign | 0.2453 | benign | -1.133 | Destabilizing | 0.001 | N | 0.224 | neutral | D | 0.526498931 | None | None | N |
E/F | 0.8315 | likely_pathogenic | 0.8366 | pathogenic | -0.199 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.3887 | ambiguous | 0.3749 | ambiguous | -1.111 | Destabilizing | 0.932 | D | 0.609 | neutral | D | 0.530730065 | None | None | N |
E/H | 0.5714 | likely_pathogenic | 0.5845 | pathogenic | -0.447 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
E/I | 0.4063 | ambiguous | 0.3875 | ambiguous | 0.212 | Stabilizing | 0.971 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.2803 | likely_benign | 0.274 | benign | -0.694 | Destabilizing | 0.883 | D | 0.487 | neutral | N | 0.496265848 | None | None | N |
E/L | 0.5448 | ambiguous | 0.5366 | ambiguous | 0.212 | Stabilizing | 0.971 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/M | 0.5859 | likely_pathogenic | 0.5692 | pathogenic | 0.535 | Stabilizing | 0.986 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/N | 0.4286 | ambiguous | 0.4339 | ambiguous | -1.14 | Destabilizing | 0.793 | D | 0.622 | neutral | None | None | None | None | N |
E/P | 0.9498 | likely_pathogenic | 0.9499 | pathogenic | -0.089 | Destabilizing | 0.833 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/Q | 0.1664 | likely_benign | 0.1642 | benign | -1.004 | Destabilizing | 0.975 | D | 0.611 | neutral | N | 0.485251937 | None | None | N |
E/R | 0.4165 | ambiguous | 0.4234 | ambiguous | -0.373 | Destabilizing | 0.986 | D | 0.66 | neutral | None | None | None | None | N |
E/S | 0.2725 | likely_benign | 0.2644 | benign | -1.419 | Destabilizing | 0.844 | D | 0.497 | neutral | None | None | None | None | N |
E/T | 0.277 | likely_benign | 0.2679 | benign | -1.131 | Destabilizing | 0.963 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/V | 0.2535 | likely_benign | 0.2399 | benign | -0.089 | Destabilizing | 0.947 | D | 0.702 | prob.neutral | N | 0.504485509 | None | None | N |
E/W | 0.9544 | likely_pathogenic | 0.9579 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/Y | 0.7653 | likely_pathogenic | 0.7724 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.