Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC857025933;25934;25935 chr2:178715706;178715705;178715704chr2:179580433;179580432;179580431
N2AB825324982;24983;24984 chr2:178715706;178715705;178715704chr2:179580433;179580432;179580431
N2A732622201;22202;22203 chr2:178715706;178715705;178715704chr2:179580433;179580432;179580431
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-71
  • Domain position: 22
  • Structural Position: 31
  • Q(SASA): 0.4381
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs552462622 -0.253 0.883 N 0.487 0.404 None gnomAD-2.1.1 4.12E-05 None None None None N None 0 0 None 0 0 None 0 None 4.08E-05 8.26E-05 0
E/K rs552462622 -0.253 0.883 N 0.487 0.404 None gnomAD-3.1.2 7.23E-05 None None None None N None 9.66E-05 0 0 0 0 None 0 0 1.02938E-04 0 0
E/K rs552462622 -0.253 0.883 N 0.487 0.404 None 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
E/K rs552462622 -0.253 0.883 N 0.487 0.404 None gnomAD-4.0.0 1.44985E-04 None None None None N None 5.33732E-05 0 None 0 0 None 4.71313E-05 0 1.9045E-04 0 3.21399E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.2397 likely_benign 0.2249 benign -0.755 Destabilizing 0.804 D 0.553 neutral N 0.489708936 None None N
E/C 0.9333 likely_pathogenic 0.9328 pathogenic -0.526 Destabilizing 0.998 D 0.714 prob.delet. None None None None N
E/D 0.232 likely_benign 0.2453 benign -1.133 Destabilizing 0.001 N 0.224 neutral D 0.526498931 None None N
E/F 0.8315 likely_pathogenic 0.8366 pathogenic -0.199 Destabilizing 0.999 D 0.737 prob.delet. None None None None N
E/G 0.3887 ambiguous 0.3749 ambiguous -1.111 Destabilizing 0.932 D 0.609 neutral D 0.530730065 None None N
E/H 0.5714 likely_pathogenic 0.5845 pathogenic -0.447 Destabilizing 0.998 D 0.665 neutral None None None None N
E/I 0.4063 ambiguous 0.3875 ambiguous 0.212 Stabilizing 0.971 D 0.747 deleterious None None None None N
E/K 0.2803 likely_benign 0.274 benign -0.694 Destabilizing 0.883 D 0.487 neutral N 0.496265848 None None N
E/L 0.5448 ambiguous 0.5366 ambiguous 0.212 Stabilizing 0.971 D 0.723 prob.delet. None None None None N
E/M 0.5859 likely_pathogenic 0.5692 pathogenic 0.535 Stabilizing 0.986 D 0.713 prob.delet. None None None None N
E/N 0.4286 ambiguous 0.4339 ambiguous -1.14 Destabilizing 0.793 D 0.622 neutral None None None None N
E/P 0.9498 likely_pathogenic 0.9499 pathogenic -0.089 Destabilizing 0.833 D 0.739 prob.delet. None None None None N
E/Q 0.1664 likely_benign 0.1642 benign -1.004 Destabilizing 0.975 D 0.611 neutral N 0.485251937 None None N
E/R 0.4165 ambiguous 0.4234 ambiguous -0.373 Destabilizing 0.986 D 0.66 neutral None None None None N
E/S 0.2725 likely_benign 0.2644 benign -1.419 Destabilizing 0.844 D 0.497 neutral None None None None N
E/T 0.277 likely_benign 0.2679 benign -1.131 Destabilizing 0.963 D 0.688 prob.neutral None None None None N
E/V 0.2535 likely_benign 0.2399 benign -0.089 Destabilizing 0.947 D 0.702 prob.neutral N 0.504485509 None None N
E/W 0.9544 likely_pathogenic 0.9579 pathogenic 0.02 Stabilizing 1.0 D 0.716 prob.delet. None None None None N
E/Y 0.7653 likely_pathogenic 0.7724 pathogenic 0.03 Stabilizing 1.0 D 0.731 prob.delet. None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.