Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8573 | 25942;25943;25944 | chr2:178715697;178715696;178715695 | chr2:179580424;179580423;179580422 |
N2AB | 8256 | 24991;24992;24993 | chr2:178715697;178715696;178715695 | chr2:179580424;179580423;179580422 |
N2A | 7329 | 22210;22211;22212 | chr2:178715697;178715696;178715695 | chr2:179580424;179580423;179580422 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs142609645 | -0.557 | 0.009 | N | 0.453 | 0.236 | None | gnomAD-2.1.1 | 1.1E-05 | None | None | None | None | N | None | 1.27378E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/L | rs142609645 | -0.557 | 0.009 | N | 0.453 | 0.236 | None | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | N | None | 2.65393E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/L | rs142609645 | -0.557 | 0.009 | N | 0.453 | 0.236 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
I/L | rs142609645 | -0.557 | 0.009 | N | 0.453 | 0.236 | None | gnomAD-4.0.0 | 8.07615E-06 | None | None | None | None | N | None | 1.73356E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6483 | likely_pathogenic | 0.6129 | pathogenic | -2.351 | Highly Destabilizing | 0.025 | N | 0.441 | neutral | None | None | None | None | N |
I/C | 0.9691 | likely_pathogenic | 0.9637 | pathogenic | -1.388 | Destabilizing | 0.992 | D | 0.771 | deleterious | None | None | None | None | N |
I/D | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -2.438 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/E | 0.9927 | likely_pathogenic | 0.9912 | pathogenic | -2.147 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
I/F | 0.5792 | likely_pathogenic | 0.5548 | ambiguous | -1.313 | Destabilizing | 0.827 | D | 0.751 | deleterious | N | 0.494347426 | None | None | N |
I/G | 0.9737 | likely_pathogenic | 0.9678 | pathogenic | -2.95 | Highly Destabilizing | 0.82 | D | 0.779 | deleterious | None | None | None | None | N |
I/H | 0.9943 | likely_pathogenic | 0.993 | pathogenic | -2.476 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
I/K | 0.9904 | likely_pathogenic | 0.989 | pathogenic | -1.556 | Destabilizing | 0.967 | D | 0.811 | deleterious | None | None | None | None | N |
I/L | 0.2224 | likely_benign | 0.2009 | benign | -0.588 | Destabilizing | 0.009 | N | 0.453 | neutral | N | 0.491269553 | None | None | N |
I/M | 0.2258 | likely_benign | 0.2287 | benign | -0.574 | Destabilizing | 0.785 | D | 0.691 | prob.neutral | D | 0.52982192 | None | None | N |
I/N | 0.9746 | likely_pathogenic | 0.9714 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.541685205 | None | None | N |
I/P | 0.9885 | likely_pathogenic | 0.9856 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/Q | 0.9895 | likely_pathogenic | 0.9875 | pathogenic | -1.776 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
I/R | 0.9835 | likely_pathogenic | 0.9803 | pathogenic | -1.566 | Destabilizing | 0.997 | D | 0.829 | deleterious | None | None | None | None | N |
I/S | 0.8992 | likely_pathogenic | 0.884 | pathogenic | -2.776 | Highly Destabilizing | 0.981 | D | 0.75 | deleterious | N | 0.499298176 | None | None | N |
I/T | 0.4917 | ambiguous | 0.4528 | ambiguous | -2.322 | Highly Destabilizing | 0.97 | D | 0.706 | prob.neutral | N | 0.493333468 | None | None | N |
I/V | 0.0933 | likely_benign | 0.0769 | benign | -1.16 | Destabilizing | None | N | 0.216 | neutral | N | 0.407932603 | None | None | N |
I/W | 0.9879 | likely_pathogenic | 0.9877 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
I/Y | 0.9644 | likely_pathogenic | 0.9616 | pathogenic | -1.381 | Destabilizing | 0.979 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.