Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8582 | 25969;25970;25971 | chr2:178715670;178715669;178715668 | chr2:179580397;179580396;179580395 |
N2AB | 8265 | 25018;25019;25020 | chr2:178715670;178715669;178715668 | chr2:179580397;179580396;179580395 |
N2A | 7338 | 22237;22238;22239 | chr2:178715670;178715669;178715668 | chr2:179580397;179580396;179580395 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.123 | N | 0.469 | 0.22 | 0.585261766934 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | rs1420202972 | -1.593 | None | N | 0.219 | 0.094 | 0.245101548738 | gnomAD-2.1.1 | 7.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
L/V | rs1420202972 | -1.593 | None | N | 0.219 | 0.094 | 0.245101548738 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1420202972 | -1.593 | None | N | 0.219 | 0.094 | 0.245101548738 | gnomAD-4.0.0 | 2.56512E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79067E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.117 | likely_benign | 0.1093 | benign | -2.199 | Highly Destabilizing | 0.495 | N | 0.483 | neutral | None | None | None | None | N |
L/C | 0.2786 | likely_benign | 0.281 | benign | -0.959 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | N |
L/D | 0.3665 | ambiguous | 0.3389 | benign | -2.2 | Highly Destabilizing | 0.943 | D | 0.617 | neutral | None | None | None | None | N |
L/E | 0.1763 | likely_benign | 0.1654 | benign | -2.106 | Highly Destabilizing | 0.925 | D | 0.621 | neutral | None | None | None | None | N |
L/F | 0.0773 | likely_benign | 0.08 | benign | -1.479 | Destabilizing | 0.833 | D | 0.525 | neutral | N | 0.503563356 | None | None | N |
L/G | 0.3011 | likely_benign | 0.2868 | benign | -2.59 | Highly Destabilizing | 0.826 | D | 0.589 | neutral | None | None | None | None | N |
L/H | 0.0865 | likely_benign | 0.0822 | benign | -1.888 | Destabilizing | 0.994 | D | 0.635 | neutral | None | None | None | None | N |
L/I | 0.0631 | likely_benign | 0.0623 | benign | -1.122 | Destabilizing | 0.001 | N | 0.337 | neutral | N | 0.447093998 | None | None | N |
L/K | 0.1071 | likely_benign | 0.0997 | benign | -1.592 | Destabilizing | 0.123 | N | 0.595 | neutral | None | None | None | None | N |
L/M | 0.0812 | likely_benign | 0.0809 | benign | -0.678 | Destabilizing | 0.801 | D | 0.549 | neutral | None | None | None | None | N |
L/N | 0.1634 | likely_benign | 0.1483 | benign | -1.507 | Destabilizing | 0.943 | D | 0.621 | neutral | None | None | None | None | N |
L/P | 0.8457 | likely_pathogenic | 0.8435 | pathogenic | -1.459 | Destabilizing | 0.971 | D | 0.621 | neutral | None | None | None | None | N |
L/Q | 0.0712 | likely_benign | 0.0688 | benign | -1.607 | Destabilizing | 0.933 | D | 0.591 | neutral | None | None | None | None | N |
L/R | 0.0732 | likely_benign | 0.069 | benign | -1.019 | Destabilizing | 0.931 | D | 0.599 | neutral | None | None | None | None | N |
L/S | 0.1048 | likely_benign | 0.0964 | benign | -2.062 | Highly Destabilizing | 0.123 | N | 0.469 | neutral | N | 0.446010989 | None | None | N |
L/T | 0.0818 | likely_benign | 0.0753 | benign | -1.862 | Destabilizing | 0.008 | N | 0.267 | neutral | None | None | None | None | N |
L/V | 0.06 | likely_benign | 0.0608 | benign | -1.459 | Destabilizing | None | N | 0.219 | neutral | N | 0.422254269 | None | None | N |
L/W | 0.1242 | likely_benign | 0.1306 | benign | -1.74 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
L/Y | 0.1795 | likely_benign | 0.1748 | benign | -1.499 | Destabilizing | 0.612 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.