Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC858225969;25970;25971 chr2:178715670;178715669;178715668chr2:179580397;179580396;179580395
N2AB826525018;25019;25020 chr2:178715670;178715669;178715668chr2:179580397;179580396;179580395
N2A733822237;22238;22239 chr2:178715670;178715669;178715668chr2:179580397;179580396;179580395
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTA
  • RefSeq wild type template codon: AAT
  • Domain: Ig-71
  • Domain position: 34
  • Structural Position: 47
  • Q(SASA): 0.2553
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/S None None 0.123 N 0.469 0.22 0.585261766934 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0
L/V rs1420202972 -1.593 None N 0.219 0.094 0.245101548738 gnomAD-2.1.1 7.18E-06 None None None None N None 0 0 None 0 0 None 0 None 0 1.57E-05 0
L/V rs1420202972 -1.593 None N 0.219 0.094 0.245101548738 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/V rs1420202972 -1.593 None N 0.219 0.094 0.245101548738 gnomAD-4.0.0 2.56512E-06 None None None None N None 0 0 None 0 0 None 0 0 4.79067E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.117 likely_benign 0.1093 benign -2.199 Highly Destabilizing 0.495 N 0.483 neutral None None None None N
L/C 0.2786 likely_benign 0.281 benign -0.959 Destabilizing 0.997 D 0.545 neutral None None None None N
L/D 0.3665 ambiguous 0.3389 benign -2.2 Highly Destabilizing 0.943 D 0.617 neutral None None None None N
L/E 0.1763 likely_benign 0.1654 benign -2.106 Highly Destabilizing 0.925 D 0.621 neutral None None None None N
L/F 0.0773 likely_benign 0.08 benign -1.479 Destabilizing 0.833 D 0.525 neutral N 0.503563356 None None N
L/G 0.3011 likely_benign 0.2868 benign -2.59 Highly Destabilizing 0.826 D 0.589 neutral None None None None N
L/H 0.0865 likely_benign 0.0822 benign -1.888 Destabilizing 0.994 D 0.635 neutral None None None None N
L/I 0.0631 likely_benign 0.0623 benign -1.122 Destabilizing 0.001 N 0.337 neutral N 0.447093998 None None N
L/K 0.1071 likely_benign 0.0997 benign -1.592 Destabilizing 0.123 N 0.595 neutral None None None None N
L/M 0.0812 likely_benign 0.0809 benign -0.678 Destabilizing 0.801 D 0.549 neutral None None None None N
L/N 0.1634 likely_benign 0.1483 benign -1.507 Destabilizing 0.943 D 0.621 neutral None None None None N
L/P 0.8457 likely_pathogenic 0.8435 pathogenic -1.459 Destabilizing 0.971 D 0.621 neutral None None None None N
L/Q 0.0712 likely_benign 0.0688 benign -1.607 Destabilizing 0.933 D 0.591 neutral None None None None N
L/R 0.0732 likely_benign 0.069 benign -1.019 Destabilizing 0.931 D 0.599 neutral None None None None N
L/S 0.1048 likely_benign 0.0964 benign -2.062 Highly Destabilizing 0.123 N 0.469 neutral N 0.446010989 None None N
L/T 0.0818 likely_benign 0.0753 benign -1.862 Destabilizing 0.008 N 0.267 neutral None None None None N
L/V 0.06 likely_benign 0.0608 benign -1.459 Destabilizing None N 0.219 neutral N 0.422254269 None None N
L/W 0.1242 likely_benign 0.1306 benign -1.74 Destabilizing 0.998 D 0.632 neutral None None None None N
L/Y 0.1795 likely_benign 0.1748 benign -1.499 Destabilizing 0.612 D 0.557 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.