Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8584 | 25975;25976;25977 | chr2:178715664;178715663;178715662 | chr2:179580391;179580390;179580389 |
N2AB | 8267 | 25024;25025;25026 | chr2:178715664;178715663;178715662 | chr2:179580391;179580390;179580389 |
N2A | 7340 | 22243;22244;22245 | chr2:178715664;178715663;178715662 | chr2:179580391;179580390;179580389 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1440957407 | None | 0.999 | N | 0.674 | 0.315 | 0.475741759771 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
Y/C | rs1440957407 | None | 0.999 | N | 0.674 | 0.315 | 0.475741759771 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
Y/C | rs1440957407 | None | 0.999 | N | 0.674 | 0.315 | 0.475741759771 | gnomAD-4.0.0 | 1.3146E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94066E-05 | 0 | 0 |
Y/H | None | None | 0.989 | N | 0.667 | 0.361 | 0.350964488264 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.869 | likely_pathogenic | 0.8482 | pathogenic | -2.944 | Highly Destabilizing | 0.973 | D | 0.605 | neutral | None | None | None | None | N |
Y/C | 0.3932 | ambiguous | 0.3667 | ambiguous | -1.536 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.52063085 | None | None | N |
Y/D | 0.8218 | likely_pathogenic | 0.8043 | pathogenic | -2.189 | Highly Destabilizing | 0.997 | D | 0.724 | prob.delet. | N | 0.520377361 | None | None | N |
Y/E | 0.8789 | likely_pathogenic | 0.8608 | pathogenic | -2.082 | Highly Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | N |
Y/F | 0.0803 | likely_benign | 0.0758 | benign | -1.266 | Destabilizing | 0.005 | N | 0.245 | neutral | N | 0.438372075 | None | None | N |
Y/G | 0.7864 | likely_pathogenic | 0.7605 | pathogenic | -3.281 | Highly Destabilizing | 0.992 | D | 0.691 | prob.neutral | None | None | None | None | N |
Y/H | 0.2896 | likely_benign | 0.2662 | benign | -1.591 | Destabilizing | 0.989 | D | 0.667 | neutral | N | 0.484079945 | None | None | N |
Y/I | 0.6644 | likely_pathogenic | 0.6478 | pathogenic | -1.877 | Destabilizing | 0.551 | D | 0.641 | neutral | None | None | None | None | N |
Y/K | 0.6931 | likely_pathogenic | 0.6577 | pathogenic | -1.625 | Destabilizing | 0.979 | D | 0.656 | neutral | None | None | None | None | N |
Y/L | 0.5866 | likely_pathogenic | 0.5596 | ambiguous | -1.877 | Destabilizing | 0.259 | N | 0.514 | neutral | None | None | None | None | N |
Y/M | 0.6842 | likely_pathogenic | 0.6554 | pathogenic | -1.562 | Destabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | N |
Y/N | 0.472 | ambiguous | 0.4436 | ambiguous | -1.965 | Destabilizing | 0.997 | D | 0.688 | prob.neutral | N | 0.482523009 | None | None | N |
Y/P | 0.9954 | likely_pathogenic | 0.9947 | pathogenic | -2.235 | Highly Destabilizing | 0.997 | D | 0.728 | prob.delet. | None | None | None | None | N |
Y/Q | 0.6972 | likely_pathogenic | 0.6638 | pathogenic | -1.959 | Destabilizing | 0.992 | D | 0.683 | prob.neutral | None | None | None | None | N |
Y/R | 0.5614 | ambiguous | 0.5269 | ambiguous | -1.055 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | None | None | None | None | N |
Y/S | 0.6142 | likely_pathogenic | 0.581 | pathogenic | -2.486 | Highly Destabilizing | 0.99 | D | 0.651 | neutral | N | 0.466936742 | None | None | N |
Y/T | 0.7689 | likely_pathogenic | 0.7407 | pathogenic | -2.281 | Highly Destabilizing | 0.992 | D | 0.655 | neutral | None | None | None | None | N |
Y/V | 0.6036 | likely_pathogenic | 0.5928 | pathogenic | -2.235 | Highly Destabilizing | 0.948 | D | 0.593 | neutral | None | None | None | None | N |
Y/W | 0.4497 | ambiguous | 0.4362 | ambiguous | -0.675 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.