Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8600 | 26023;26024;26025 | chr2:178715616;178715615;178715614 | chr2:179580343;179580342;179580341 |
N2AB | 8283 | 25072;25073;25074 | chr2:178715616;178715615;178715614 | chr2:179580343;179580342;179580341 |
N2A | 7356 | 22291;22292;22293 | chr2:178715616;178715615;178715614 | chr2:179580343;179580342;179580341 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.97 | N | 0.635 | 0.357 | 0.335910606209 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
F/Y | None | None | 0.989 | N | 0.651 | 0.326 | 0.530655398971 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8965 | likely_pathogenic | 0.8434 | pathogenic | -1.914 | Destabilizing | 0.583 | D | 0.545 | neutral | None | None | None | None | N |
F/C | 0.8503 | likely_pathogenic | 0.7815 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.504063754 | None | None | N |
F/D | 0.9753 | likely_pathogenic | 0.9602 | pathogenic | -0.212 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
F/E | 0.9769 | likely_pathogenic | 0.9615 | pathogenic | -0.113 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
F/G | 0.9687 | likely_pathogenic | 0.9503 | pathogenic | -2.249 | Highly Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
F/H | 0.8643 | likely_pathogenic | 0.8142 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
F/I | 0.6245 | likely_pathogenic | 0.5122 | ambiguous | -0.921 | Destabilizing | 0.985 | D | 0.699 | prob.neutral | N | 0.484794184 | None | None | N |
F/K | 0.9757 | likely_pathogenic | 0.9601 | pathogenic | -1.021 | Destabilizing | 0.997 | D | 0.805 | deleterious | None | None | None | None | N |
F/L | 0.9512 | likely_pathogenic | 0.925 | pathogenic | -0.921 | Destabilizing | 0.97 | D | 0.635 | neutral | N | 0.482236516 | None | None | N |
F/M | 0.7755 | likely_pathogenic | 0.7088 | pathogenic | -0.772 | Destabilizing | 0.989 | D | 0.741 | deleterious | None | None | None | None | N |
F/N | 0.923 | likely_pathogenic | 0.8881 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/P | 0.9981 | likely_pathogenic | 0.9966 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
F/Q | 0.9589 | likely_pathogenic | 0.9364 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
F/R | 0.9391 | likely_pathogenic | 0.9108 | pathogenic | -0.489 | Destabilizing | 0.997 | D | 0.81 | deleterious | None | None | None | None | N |
F/S | 0.802 | likely_pathogenic | 0.7257 | pathogenic | -1.962 | Destabilizing | 0.975 | D | 0.732 | prob.delet. | N | 0.512932201 | None | None | N |
F/T | 0.8442 | likely_pathogenic | 0.7765 | pathogenic | -1.769 | Destabilizing | 0.997 | D | 0.749 | deleterious | None | None | None | None | N |
F/V | 0.5793 | likely_pathogenic | 0.472 | ambiguous | -1.243 | Destabilizing | 0.959 | D | 0.706 | prob.neutral | D | 0.52616807 | None | None | N |
F/W | 0.7193 | likely_pathogenic | 0.6681 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
F/Y | 0.3721 | ambiguous | 0.3204 | benign | -0.241 | Destabilizing | 0.989 | D | 0.651 | neutral | N | 0.509699895 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.