Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8602 | 26029;26030;26031 | chr2:178715610;178715609;178715608 | chr2:179580337;179580336;179580335 |
N2AB | 8285 | 25078;25079;25080 | chr2:178715610;178715609;178715608 | chr2:179580337;179580336;179580335 |
N2A | 7358 | 22297;22298;22299 | chr2:178715610;178715609;178715608 | chr2:179580337;179580336;179580335 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.006 | N | 0.255 | 0.06 | 0.0611884634855 | gnomAD-4.0.0 | 6.84271E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.326 | likely_benign | 0.2557 | benign | 0.01 | Stabilizing | 0.477 | N | 0.388 | neutral | N | 0.46098526 | None | None | I |
D/C | 0.8552 | likely_pathogenic | 0.7798 | pathogenic | -0.271 | Destabilizing | 0.995 | D | 0.612 | neutral | None | None | None | None | I |
D/E | 0.2649 | likely_benign | 0.1749 | benign | -0.422 | Destabilizing | 0.006 | N | 0.255 | neutral | N | 0.481528206 | None | None | I |
D/F | 0.8261 | likely_pathogenic | 0.7583 | pathogenic | -0.011 | Destabilizing | 0.995 | D | 0.526 | neutral | None | None | None | None | I |
D/G | 0.2008 | likely_benign | 0.1646 | benign | -0.1 | Destabilizing | 0.645 | D | 0.459 | neutral | N | 0.484795011 | None | None | I |
D/H | 0.4867 | ambiguous | 0.4114 | ambiguous | 0.652 | Stabilizing | 0.98 | D | 0.42 | neutral | N | 0.472443697 | None | None | I |
D/I | 0.8072 | likely_pathogenic | 0.7033 | pathogenic | 0.235 | Stabilizing | 0.945 | D | 0.543 | neutral | None | None | None | None | I |
D/K | 0.6526 | likely_pathogenic | 0.5411 | ambiguous | 0.426 | Stabilizing | 0.547 | D | 0.419 | neutral | None | None | None | None | I |
D/L | 0.7028 | likely_pathogenic | 0.5983 | pathogenic | 0.235 | Stabilizing | 0.894 | D | 0.544 | neutral | None | None | None | None | I |
D/M | 0.8711 | likely_pathogenic | 0.7843 | pathogenic | -0.028 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | I |
D/N | 0.1168 | likely_benign | 0.1062 | benign | 0.021 | Stabilizing | 0.053 | N | 0.271 | neutral | N | 0.446588913 | None | None | I |
D/P | 0.8889 | likely_pathogenic | 0.8207 | pathogenic | 0.178 | Stabilizing | 0.945 | D | 0.417 | neutral | None | None | None | None | I |
D/Q | 0.5525 | ambiguous | 0.4398 | ambiguous | 0.043 | Stabilizing | 0.809 | D | 0.396 | neutral | None | None | None | None | I |
D/R | 0.6594 | likely_pathogenic | 0.5702 | pathogenic | 0.682 | Stabilizing | 0.894 | D | 0.473 | neutral | None | None | None | None | I |
D/S | 0.1962 | likely_benign | 0.1618 | benign | -0.016 | Destabilizing | 0.547 | D | 0.389 | neutral | None | None | None | None | I |
D/T | 0.5545 | ambiguous | 0.4425 | ambiguous | 0.086 | Stabilizing | 0.894 | D | 0.383 | neutral | None | None | None | None | I |
D/V | 0.62 | likely_pathogenic | 0.4963 | ambiguous | 0.178 | Stabilizing | 0.864 | D | 0.544 | neutral | N | 0.513767542 | None | None | I |
D/W | 0.9574 | likely_pathogenic | 0.9316 | pathogenic | 0.043 | Stabilizing | 0.995 | D | 0.626 | neutral | None | None | None | None | I |
D/Y | 0.4128 | ambiguous | 0.3588 | ambiguous | 0.212 | Stabilizing | 0.993 | D | 0.528 | neutral | N | 0.484306982 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.