Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8607 | 26044;26045;26046 | chr2:178715595;178715594;178715593 | chr2:179580322;179580321;179580320 |
N2AB | 8290 | 25093;25094;25095 | chr2:178715595;178715594;178715593 | chr2:179580322;179580321;179580320 |
N2A | 7363 | 22312;22313;22314 | chr2:178715595;178715594;178715593 | chr2:179580322;179580321;179580320 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs780404365 | -1.635 | 1.0 | D | 0.924 | 0.841 | 0.895674922005 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
L/R | None | None | 0.999 | D | 0.918 | 0.831 | 0.876399648183 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85901E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7967 | likely_pathogenic | 0.7563 | pathogenic | -2.593 | Highly Destabilizing | 0.95 | D | 0.767 | deleterious | None | None | None | None | N |
L/C | 0.8834 | likely_pathogenic | 0.8653 | pathogenic | -1.842 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -3.446 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.989 | likely_pathogenic | 0.9859 | pathogenic | -3.14 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.4164 | ambiguous | 0.3848 | ambiguous | -1.66 | Destabilizing | 0.963 | D | 0.795 | deleterious | None | None | None | None | N |
L/G | 0.9754 | likely_pathogenic | 0.9693 | pathogenic | -3.15 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/H | 0.9756 | likely_pathogenic | 0.9672 | pathogenic | -2.935 | Highly Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
L/I | 0.1173 | likely_benign | 0.1011 | benign | -0.904 | Destabilizing | 0.002 | N | 0.369 | neutral | None | None | None | None | N |
L/K | 0.9831 | likely_pathogenic | 0.9789 | pathogenic | -2.052 | Highly Destabilizing | 0.992 | D | 0.901 | deleterious | None | None | None | None | N |
L/M | 0.174 | likely_benign | 0.1639 | benign | -1.117 | Destabilizing | 0.856 | D | 0.774 | deleterious | D | 0.550020225 | None | None | N |
L/N | 0.9918 | likely_pathogenic | 0.9884 | pathogenic | -2.796 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/P | 0.9912 | likely_pathogenic | 0.9889 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.924 | deleterious | D | 0.581001722 | None | None | N |
L/Q | 0.95 | likely_pathogenic | 0.9384 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.581001722 | None | None | N |
L/R | 0.9656 | likely_pathogenic | 0.9577 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.918 | deleterious | D | 0.581001722 | None | None | N |
L/S | 0.9725 | likely_pathogenic | 0.9588 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/T | 0.896 | likely_pathogenic | 0.8598 | pathogenic | -2.782 | Highly Destabilizing | 0.952 | D | 0.83 | deleterious | None | None | None | None | N |
L/V | 0.1972 | likely_benign | 0.17 | benign | -1.461 | Destabilizing | 0.038 | N | 0.741 | deleterious | D | 0.547297973 | None | None | N |
L/W | 0.8598 | likely_pathogenic | 0.8405 | pathogenic | -2.044 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/Y | 0.9288 | likely_pathogenic | 0.9165 | pathogenic | -1.853 | Destabilizing | 0.862 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.