Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8613 | 26062;26063;26064 | chr2:178715577;178715576;178715575 | chr2:179580304;179580303;179580302 |
N2AB | 8296 | 25111;25112;25113 | chr2:178715577;178715576;178715575 | chr2:179580304;179580303;179580302 |
N2A | 7369 | 22330;22331;22332 | chr2:178715577;178715576;178715575 | chr2:179580304;179580303;179580302 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.023 | N | 0.251 | 0.069 | 0.0716867268079 | gnomAD-4.0.0 | 6.84264E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.087 | likely_benign | 0.0803 | benign | -0.564 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | N |
S/C | 0.1212 | likely_benign | 0.116 | benign | -0.593 | Destabilizing | 0.951 | D | 0.411 | neutral | D | 0.52434406 | None | None | N |
S/D | 0.1879 | likely_benign | 0.1941 | benign | -0.979 | Destabilizing | 0.042 | N | 0.282 | neutral | None | None | None | None | N |
S/E | 0.3035 | likely_benign | 0.3053 | benign | -0.991 | Destabilizing | 0.048 | N | 0.288 | neutral | None | None | None | None | N |
S/F | 0.2568 | likely_benign | 0.2305 | benign | -0.875 | Destabilizing | 0.962 | D | 0.454 | neutral | None | None | None | None | N |
S/G | 0.072 | likely_benign | 0.0731 | benign | -0.783 | Destabilizing | None | N | 0.119 | neutral | N | 0.47849434 | None | None | N |
S/H | 0.179 | likely_benign | 0.1873 | benign | -1.32 | Destabilizing | 0.746 | D | 0.425 | neutral | None | None | None | None | N |
S/I | 0.1586 | likely_benign | 0.1546 | benign | -0.094 | Destabilizing | 0.904 | D | 0.472 | neutral | D | 0.534771698 | None | None | N |
S/K | 0.2593 | likely_benign | 0.2724 | benign | -0.772 | Destabilizing | 0.119 | N | 0.2 | neutral | None | None | None | None | N |
S/L | 0.1082 | likely_benign | 0.0993 | benign | -0.094 | Destabilizing | 0.64 | D | 0.445 | neutral | None | None | None | None | N |
S/M | 0.1769 | likely_benign | 0.169 | benign | 0.273 | Stabilizing | 0.962 | D | 0.423 | neutral | None | None | None | None | N |
S/N | 0.0901 | likely_benign | 0.0916 | benign | -0.847 | Destabilizing | None | N | 0.192 | neutral | D | 0.525842783 | None | None | N |
S/P | 0.5371 | ambiguous | 0.4602 | ambiguous | -0.218 | Destabilizing | 0.15 | N | 0.456 | neutral | None | None | None | None | N |
S/Q | 0.2425 | likely_benign | 0.2584 | benign | -1.106 | Destabilizing | 0.246 | N | 0.348 | neutral | None | None | None | None | N |
S/R | 0.1999 | likely_benign | 0.2082 | benign | -0.557 | Destabilizing | 0.023 | N | 0.251 | neutral | N | 0.50275528 | None | None | N |
S/T | 0.0714 | likely_benign | 0.0711 | benign | -0.776 | Destabilizing | None | N | 0.177 | neutral | N | 0.450248947 | None | None | N |
S/V | 0.1763 | likely_benign | 0.1642 | benign | -0.218 | Destabilizing | 0.4 | N | 0.471 | neutral | None | None | None | None | N |
S/W | 0.3161 | likely_benign | 0.3036 | benign | -0.893 | Destabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
S/Y | 0.1988 | likely_benign | 0.188 | benign | -0.591 | Destabilizing | 0.948 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.