Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8614 | 26065;26066;26067 | chr2:178715574;178715573;178715572 | chr2:179580301;179580300;179580299 |
N2AB | 8297 | 25114;25115;25116 | chr2:178715574;178715573;178715572 | chr2:179580301;179580300;179580299 |
N2A | 7370 | 22333;22334;22335 | chr2:178715574;178715573;178715572 | chr2:179580301;179580300;179580299 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.202 | N | 0.175 | 0.072 | 0.220303561663 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1166 | likely_benign | 0.1102 | benign | -0.706 | Destabilizing | 0.202 | N | 0.175 | neutral | N | 0.443663251 | None | None | I |
V/C | 0.7045 | likely_pathogenic | 0.7022 | pathogenic | -0.664 | Destabilizing | 0.985 | D | 0.273 | neutral | None | None | None | None | I |
V/D | 0.3023 | likely_benign | 0.2763 | benign | -0.484 | Destabilizing | 0.97 | D | 0.356 | neutral | N | 0.511408396 | None | None | I |
V/E | 0.208 | likely_benign | 0.1983 | benign | -0.604 | Destabilizing | 0.875 | D | 0.327 | neutral | None | None | None | None | I |
V/F | 0.1513 | likely_benign | 0.1423 | benign | -0.948 | Destabilizing | 0.001 | N | 0.177 | neutral | N | 0.487531458 | None | None | I |
V/G | 0.1823 | likely_benign | 0.178 | benign | -0.849 | Destabilizing | 0.927 | D | 0.348 | neutral | N | 0.502692912 | None | None | I |
V/H | 0.4611 | ambiguous | 0.4408 | ambiguous | -0.37 | Destabilizing | 0.885 | D | 0.329 | neutral | None | None | None | None | I |
V/I | 0.071 | likely_benign | 0.0692 | benign | -0.477 | Destabilizing | None | N | 0.215 | neutral | N | 0.45486168 | None | None | I |
V/K | 0.2258 | likely_benign | 0.2177 | benign | -0.486 | Destabilizing | 0.834 | D | 0.323 | neutral | None | None | None | None | I |
V/L | 0.1362 | likely_benign | 0.1295 | benign | -0.477 | Destabilizing | None | N | 0.089 | neutral | N | 0.423863982 | None | None | I |
V/M | 0.1016 | likely_benign | 0.099 | benign | -0.311 | Destabilizing | 0.791 | D | 0.278 | neutral | None | None | None | None | I |
V/N | 0.2301 | likely_benign | 0.2136 | benign | -0.219 | Destabilizing | 0.695 | D | 0.353 | neutral | None | None | None | None | I |
V/P | 0.281 | likely_benign | 0.2556 | benign | -0.518 | Destabilizing | 0.695 | D | 0.329 | neutral | None | None | None | None | I |
V/Q | 0.2351 | likely_benign | 0.2313 | benign | -0.531 | Destabilizing | 0.916 | D | 0.319 | neutral | None | None | None | None | I |
V/R | 0.1915 | likely_benign | 0.1885 | benign | 0.099 | Stabilizing | 0.97 | D | 0.354 | neutral | None | None | None | None | I |
V/S | 0.1613 | likely_benign | 0.1501 | benign | -0.617 | Destabilizing | 0.623 | D | 0.3 | neutral | None | None | None | None | I |
V/T | 0.1079 | likely_benign | 0.1008 | benign | -0.639 | Destabilizing | 0.247 | N | 0.153 | neutral | None | None | None | None | I |
V/W | 0.6399 | likely_pathogenic | 0.6279 | pathogenic | -0.983 | Destabilizing | 0.997 | D | 0.343 | neutral | None | None | None | None | I |
V/Y | 0.465 | ambiguous | 0.441 | ambiguous | -0.682 | Destabilizing | 0.02 | N | 0.19 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.