Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8615 | 26068;26069;26070 | chr2:178715571;178715570;178715569 | chr2:179580298;179580297;179580296 |
N2AB | 8298 | 25117;25118;25119 | chr2:178715571;178715570;178715569 | chr2:179580298;179580297;179580296 |
N2A | 7371 | 22336;22337;22338 | chr2:178715571;178715570;178715569 | chr2:179580298;179580297;179580296 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs758944073 | 0.148 | 0.001 | N | 0.147 | 0.139 | 0.0666544352282 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
E/D | rs758944073 | 0.148 | 0.001 | N | 0.147 | 0.139 | 0.0666544352282 | gnomAD-4.0.0 | 6.84269E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87308E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1246 | likely_benign | 0.1248 | benign | -0.364 | Destabilizing | 0.789 | D | 0.481 | neutral | N | 0.509640314 | None | None | N |
E/C | 0.8328 | likely_pathogenic | 0.8278 | pathogenic | 0.066 | Stabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | N |
E/D | 0.1057 | likely_benign | 0.1017 | benign | -0.179 | Destabilizing | 0.001 | N | 0.147 | neutral | N | 0.500058039 | None | None | N |
E/F | 0.6921 | likely_pathogenic | 0.6842 | pathogenic | -0.34 | Destabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
E/G | 0.1392 | likely_benign | 0.1392 | benign | -0.524 | Destabilizing | 0.926 | D | 0.48 | neutral | N | 0.472229888 | None | None | N |
E/H | 0.3907 | ambiguous | 0.3821 | ambiguous | -0.053 | Destabilizing | 0.993 | D | 0.476 | neutral | None | None | None | None | N |
E/I | 0.3708 | ambiguous | 0.3749 | ambiguous | 0.011 | Stabilizing | 0.938 | D | 0.527 | neutral | None | None | None | None | N |
E/K | 0.1198 | likely_benign | 0.1218 | benign | 0.454 | Stabilizing | 0.874 | D | 0.518 | neutral | N | 0.468938205 | None | None | N |
E/L | 0.3582 | ambiguous | 0.3549 | ambiguous | 0.011 | Stabilizing | 0.811 | D | 0.453 | neutral | None | None | None | None | N |
E/M | 0.4168 | ambiguous | 0.4193 | ambiguous | 0.16 | Stabilizing | 0.984 | D | 0.509 | neutral | None | None | None | None | N |
E/N | 0.2226 | likely_benign | 0.2173 | benign | 0.161 | Stabilizing | 0.667 | D | 0.495 | neutral | None | None | None | None | N |
E/P | 0.7005 | likely_pathogenic | 0.6613 | pathogenic | -0.095 | Destabilizing | 0.933 | D | 0.46 | neutral | None | None | None | None | N |
E/Q | 0.1324 | likely_benign | 0.1314 | benign | 0.191 | Stabilizing | 0.91 | D | 0.491 | neutral | N | 0.468293095 | None | None | N |
E/R | 0.2125 | likely_benign | 0.2112 | benign | 0.582 | Stabilizing | 0.985 | D | 0.467 | neutral | None | None | None | None | N |
E/S | 0.1626 | likely_benign | 0.1596 | benign | 0.01 | Stabilizing | 0.713 | D | 0.477 | neutral | None | None | None | None | N |
E/T | 0.1852 | likely_benign | 0.1829 | benign | 0.148 | Stabilizing | 0.084 | N | 0.236 | neutral | None | None | None | None | N |
E/V | 0.2279 | likely_benign | 0.2331 | benign | -0.095 | Destabilizing | 0.698 | D | 0.447 | neutral | N | 0.491285649 | None | None | N |
E/W | 0.8129 | likely_pathogenic | 0.8008 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/Y | 0.5714 | likely_pathogenic | 0.5626 | ambiguous | -0.106 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.