Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8619 | 26080;26081;26082 | chr2:178715559;178715558;178715557 | chr2:179580286;179580285;179580284 |
N2AB | 8302 | 25129;25130;25131 | chr2:178715559;178715558;178715557 | chr2:179580286;179580285;179580284 |
N2A | 7375 | 22348;22349;22350 | chr2:178715559;178715558;178715557 | chr2:179580286;179580285;179580284 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs2077359221 | None | 0.95 | N | 0.512 | 0.361 | 0.341696514166 | gnomAD-4.0.0 | 4.10566E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.47102E-04 | 3.59823E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2873 | likely_benign | 0.1881 | benign | -0.446 | Destabilizing | 0.637 | D | 0.533 | neutral | D | 0.534750268 | None | None | N |
D/C | 0.7429 | likely_pathogenic | 0.5908 | pathogenic | 0.049 | Stabilizing | 0.993 | D | 0.619 | neutral | None | None | None | None | N |
D/E | 0.2664 | likely_benign | 0.2072 | benign | -0.715 | Destabilizing | 0.747 | D | 0.5 | neutral | N | 0.45586541 | None | None | N |
D/F | 0.5122 | ambiguous | 0.4032 | ambiguous | -0.749 | Destabilizing | 0.993 | D | 0.632 | neutral | None | None | None | None | N |
D/G | 0.3554 | ambiguous | 0.2363 | benign | -0.683 | Destabilizing | 0.95 | D | 0.512 | neutral | N | 0.50217765 | None | None | N |
D/H | 0.3448 | ambiguous | 0.2322 | benign | -1.06 | Destabilizing | 0.998 | D | 0.561 | neutral | D | 0.531115317 | None | None | N |
D/I | 0.3 | likely_benign | 0.2195 | benign | 0.145 | Stabilizing | 0.213 | N | 0.443 | neutral | None | None | None | None | N |
D/K | 0.5143 | ambiguous | 0.3564 | ambiguous | 0.066 | Stabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
D/L | 0.415 | ambiguous | 0.3101 | benign | 0.145 | Stabilizing | 0.807 | D | 0.498 | neutral | None | None | None | None | N |
D/M | 0.6068 | likely_pathogenic | 0.506 | ambiguous | 0.657 | Stabilizing | 0.982 | D | 0.622 | neutral | None | None | None | None | N |
D/N | 0.1213 | likely_benign | 0.0902 | benign | -0.221 | Destabilizing | 0.976 | D | 0.531 | neutral | N | 0.505467511 | None | None | N |
D/P | 0.9019 | likely_pathogenic | 0.7958 | pathogenic | -0.03 | Destabilizing | 0.896 | D | 0.589 | neutral | None | None | None | None | N |
D/Q | 0.4616 | ambiguous | 0.3308 | benign | -0.187 | Destabilizing | 0.994 | D | 0.561 | neutral | None | None | None | None | N |
D/R | 0.5056 | ambiguous | 0.3545 | ambiguous | -0.062 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
D/S | 0.1988 | likely_benign | 0.1351 | benign | -0.372 | Destabilizing | 0.919 | D | 0.493 | neutral | None | None | None | None | N |
D/T | 0.3233 | likely_benign | 0.2267 | benign | -0.172 | Destabilizing | 0.715 | D | 0.477 | neutral | None | None | None | None | N |
D/V | 0.2145 | likely_benign | 0.152 | benign | -0.03 | Destabilizing | 0.015 | N | 0.398 | neutral | N | 0.440821387 | None | None | N |
D/W | 0.8834 | likely_pathogenic | 0.8239 | pathogenic | -0.73 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
D/Y | 0.1934 | likely_benign | 0.1439 | benign | -0.528 | Destabilizing | 0.997 | D | 0.637 | neutral | N | 0.486301894 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.