Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8620 | 26083;26084;26085 | chr2:178715556;178715555;178715554 | chr2:179580283;179580282;179580281 |
N2AB | 8303 | 25132;25133;25134 | chr2:178715556;178715555;178715554 | chr2:179580283;179580282;179580281 |
N2A | 7376 | 22351;22352;22353 | chr2:178715556;178715555;178715554 | chr2:179580283;179580282;179580281 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.873 | 0.872 | 0.87617659604 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9881 | likely_pathogenic | 0.9713 | pathogenic | -2.443 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/C | 0.8165 | likely_pathogenic | 0.6621 | pathogenic | -2.018 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.645297633 | None | None | N |
Y/D | 0.9959 | likely_pathogenic | 0.9897 | pathogenic | -3.079 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.661316994 | None | None | N |
Y/E | 0.9985 | likely_pathogenic | 0.996 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/F | 0.0899 | likely_benign | 0.0789 | benign | -0.924 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | D | 0.551372749 | None | None | N |
Y/G | 0.9884 | likely_pathogenic | 0.9733 | pathogenic | -2.898 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/H | 0.9488 | likely_pathogenic | 0.8874 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.66111519 | None | None | N |
Y/I | 0.6536 | likely_pathogenic | 0.558 | ambiguous | -0.934 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
Y/K | 0.9975 | likely_pathogenic | 0.9937 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/L | 0.6955 | likely_pathogenic | 0.6096 | pathogenic | -0.934 | Destabilizing | 0.997 | D | 0.78 | deleterious | None | None | None | None | N |
Y/M | 0.9081 | likely_pathogenic | 0.8553 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Y/N | 0.9741 | likely_pathogenic | 0.9392 | pathogenic | -2.831 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.661316994 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.9969 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Y/Q | 0.997 | likely_pathogenic | 0.9916 | pathogenic | -2.417 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/R | 0.991 | likely_pathogenic | 0.9792 | pathogenic | -2.133 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/S | 0.9761 | likely_pathogenic | 0.9416 | pathogenic | -3.171 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.661316994 | None | None | N |
Y/T | 0.9835 | likely_pathogenic | 0.9604 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/V | 0.6207 | likely_pathogenic | 0.5037 | ambiguous | -1.454 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Y/W | 0.7779 | likely_pathogenic | 0.7212 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.