Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8628 | 26107;26108;26109 | chr2:178715532;178715531;178715530 | chr2:179580259;179580258;179580257 |
N2AB | 8311 | 25156;25157;25158 | chr2:178715532;178715531;178715530 | chr2:179580259;179580258;179580257 |
N2A | 7384 | 22375;22376;22377 | chr2:178715532;178715531;178715530 | chr2:179580259;179580258;179580257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.682 | N | 0.495 | 0.25 | 0.434272847907 | gnomAD-4.0.0 | 1.59257E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86157E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6656 | likely_pathogenic | 0.6295 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
A/D | 0.7197 | likely_pathogenic | 0.7382 | pathogenic | -0.511 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
A/E | 0.5924 | likely_pathogenic | 0.5928 | pathogenic | -0.665 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.514765404 | None | None | I |
A/F | 0.3324 | likely_benign | 0.3416 | ambiguous | -0.915 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
A/G | 0.2879 | likely_benign | 0.2709 | benign | -0.215 | Destabilizing | 0.967 | D | 0.648 | neutral | N | 0.507243759 | None | None | I |
A/H | 0.6773 | likely_pathogenic | 0.6753 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
A/I | 0.256 | likely_benign | 0.2481 | benign | -0.4 | Destabilizing | 0.992 | D | 0.639 | neutral | None | None | None | None | I |
A/K | 0.7346 | likely_pathogenic | 0.7126 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
A/L | 0.2878 | likely_benign | 0.2866 | benign | -0.4 | Destabilizing | 0.992 | D | 0.581 | neutral | None | None | None | None | I |
A/M | 0.3063 | likely_benign | 0.3062 | benign | -0.524 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
A/N | 0.577 | likely_pathogenic | 0.5823 | pathogenic | -0.23 | Destabilizing | 0.994 | D | 0.757 | deleterious | None | None | None | None | I |
A/P | 0.8705 | likely_pathogenic | 0.8557 | pathogenic | -0.312 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | D | 0.554861481 | None | None | I |
A/Q | 0.5878 | likely_pathogenic | 0.5727 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/R | 0.6219 | likely_pathogenic | 0.5929 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
A/S | 0.1333 | likely_benign | 0.1357 | benign | -0.412 | Destabilizing | 0.881 | D | 0.648 | neutral | N | 0.50673678 | None | None | I |
A/T | 0.1497 | likely_benign | 0.1484 | benign | -0.494 | Destabilizing | 0.97 | D | 0.671 | neutral | D | 0.540209812 | None | None | I |
A/V | 0.1072 | likely_benign | 0.1049 | benign | -0.312 | Destabilizing | 0.682 | D | 0.495 | neutral | N | 0.495578591 | None | None | I |
A/W | 0.834 | likely_pathogenic | 0.8346 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
A/Y | 0.6123 | likely_pathogenic | 0.6033 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.