Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8629 | 26110;26111;26112 | chr2:178715529;178715528;178715527 | chr2:179580256;179580255;179580254 |
N2AB | 8312 | 25159;25160;25161 | chr2:178715529;178715528;178715527 | chr2:179580256;179580255;179580254 |
N2A | 7385 | 22378;22379;22380 | chr2:178715529;178715528;178715527 | chr2:179580256;179580255;179580254 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs2077356013 | None | 1.0 | D | 0.803 | 0.813 | 0.555237559564 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
G/S | rs2077356013 | None | 1.0 | D | 0.803 | 0.813 | 0.555237559564 | gnomAD-4.0.0 | 6.57479E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
G/V | None | None | 1.0 | D | 0.837 | 0.828 | 0.942225882153 | gnomAD-4.0.0 | 1.59355E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7405 | likely_pathogenic | 0.6051 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.623124139 | None | None | I |
G/C | 0.9498 | likely_pathogenic | 0.8933 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.656373687 | None | None | I |
G/D | 0.9415 | likely_pathogenic | 0.8761 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.638739891 | None | None | I |
G/E | 0.9625 | likely_pathogenic | 0.9221 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/F | 0.9849 | likely_pathogenic | 0.9733 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/H | 0.9788 | likely_pathogenic | 0.9526 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
G/I | 0.9825 | likely_pathogenic | 0.9636 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/K | 0.9777 | likely_pathogenic | 0.9502 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/L | 0.9784 | likely_pathogenic | 0.9587 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/M | 0.9869 | likely_pathogenic | 0.9728 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/N | 0.9553 | likely_pathogenic | 0.8923 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/P | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/Q | 0.9628 | likely_pathogenic | 0.921 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/R | 0.9429 | likely_pathogenic | 0.8862 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.617986156 | None | None | I |
G/S | 0.6248 | likely_pathogenic | 0.4783 | ambiguous | -0.552 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.606267201 | None | None | I |
G/T | 0.9235 | likely_pathogenic | 0.8523 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/V | 0.9566 | likely_pathogenic | 0.9164 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.655970078 | None | None | I |
G/W | 0.9803 | likely_pathogenic | 0.9654 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/Y | 0.9786 | likely_pathogenic | 0.9559 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.