Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8630 | 26113;26114;26115 | chr2:178715526;178715525;178715524 | chr2:179580253;179580252;179580251 |
N2AB | 8313 | 25162;25163;25164 | chr2:178715526;178715525;178715524 | chr2:179580253;179580252;179580251 |
N2A | 7386 | 22381;22382;22383 | chr2:178715526;178715525;178715524 | chr2:179580253;179580252;179580251 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.977 | N | 0.611 | 0.383 | 0.564651752942 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1126 | likely_benign | 0.097 | benign | -0.386 | Destabilizing | 0.01 | N | 0.438 | neutral | None | None | None | None | I |
S/C | 0.2037 | likely_benign | 0.1364 | benign | -0.318 | Destabilizing | 0.977 | D | 0.611 | neutral | N | 0.500762526 | None | None | I |
S/D | 0.3723 | ambiguous | 0.2874 | benign | -0.097 | Destabilizing | 0.41 | N | 0.469 | neutral | None | None | None | None | I |
S/E | 0.4408 | ambiguous | 0.3665 | ambiguous | -0.195 | Destabilizing | 0.493 | N | 0.462 | neutral | None | None | None | None | I |
S/F | 0.1784 | likely_benign | 0.144 | benign | -0.929 | Destabilizing | 0.949 | D | 0.687 | prob.neutral | None | None | None | None | I |
S/G | 0.122 | likely_benign | 0.0995 | benign | -0.5 | Destabilizing | 0.493 | N | 0.432 | neutral | D | 0.524600772 | None | None | I |
S/H | 0.2412 | likely_benign | 0.2039 | benign | -0.969 | Destabilizing | 0.986 | D | 0.587 | neutral | None | None | None | None | I |
S/I | 0.1349 | likely_benign | 0.1116 | benign | -0.213 | Destabilizing | 0.775 | D | 0.671 | neutral | N | 0.498040274 | None | None | I |
S/K | 0.4079 | ambiguous | 0.3382 | benign | -0.595 | Destabilizing | 0.565 | D | 0.458 | neutral | None | None | None | None | I |
S/L | 0.122 | likely_benign | 0.101 | benign | -0.213 | Destabilizing | 0.565 | D | 0.636 | neutral | None | None | None | None | I |
S/M | 0.1835 | likely_benign | 0.1645 | benign | 0.059 | Stabilizing | 0.986 | D | 0.587 | neutral | None | None | None | None | I |
S/N | 0.1158 | likely_benign | 0.0962 | benign | -0.292 | Destabilizing | 0.058 | N | 0.502 | neutral | N | 0.497026316 | None | None | I |
S/P | 0.7403 | likely_pathogenic | 0.6018 | pathogenic | -0.242 | Destabilizing | 0.832 | D | 0.567 | neutral | None | None | None | None | I |
S/Q | 0.3496 | ambiguous | 0.3048 | benign | -0.59 | Destabilizing | 0.901 | D | 0.503 | neutral | None | None | None | None | I |
S/R | 0.322 | likely_benign | 0.2614 | benign | -0.304 | Destabilizing | 0.014 | N | 0.329 | neutral | N | 0.494215159 | None | None | I |
S/T | 0.0772 | likely_benign | 0.07 | benign | -0.401 | Destabilizing | None | N | 0.183 | neutral | N | 0.50183256 | None | None | I |
S/V | 0.1647 | likely_benign | 0.1373 | benign | -0.242 | Destabilizing | 0.327 | N | 0.599 | neutral | None | None | None | None | I |
S/W | 0.3252 | likely_benign | 0.266 | benign | -0.919 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/Y | 0.1798 | likely_benign | 0.1445 | benign | -0.658 | Destabilizing | 0.983 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.