Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8631 | 26116;26117;26118 | chr2:178715523;178715522;178715521 | chr2:179580250;179580249;179580248 |
N2AB | 8314 | 25165;25166;25167 | chr2:178715523;178715522;178715521 | chr2:179580250;179580249;179580248 |
N2A | 7387 | 22384;22385;22386 | chr2:178715523;178715522;178715521 | chr2:179580250;179580249;179580248 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs769720173 | -0.694 | 0.483 | D | 0.492 | 0.208 | 0.318828661733 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.3415E-04 | None | 0 | None | 0 | 0 | 0 |
A/T | rs769720173 | -0.694 | 0.483 | D | 0.492 | 0.208 | 0.318828661733 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs769720173 | -0.694 | 0.483 | D | 0.492 | 0.208 | 0.318828661733 | gnomAD-4.0.0 | 8.98124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.69779E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6823 | likely_pathogenic | 0.5829 | pathogenic | -0.835 | Destabilizing | 0.994 | D | 0.52 | neutral | None | None | None | None | N |
A/D | 0.4728 | ambiguous | 0.3939 | ambiguous | -0.299 | Destabilizing | 0.004 | N | 0.455 | neutral | N | 0.509547966 | None | None | N |
A/E | 0.5505 | ambiguous | 0.4814 | ambiguous | -0.376 | Destabilizing | 0.57 | D | 0.514 | neutral | None | None | None | None | N |
A/F | 0.5108 | ambiguous | 0.4029 | ambiguous | -0.842 | Destabilizing | 0.98 | D | 0.592 | neutral | None | None | None | None | N |
A/G | 0.2846 | likely_benign | 0.2213 | benign | -0.795 | Destabilizing | 0.22 | N | 0.469 | neutral | D | 0.537313431 | None | None | N |
A/H | 0.708 | likely_pathogenic | 0.63 | pathogenic | -0.768 | Destabilizing | 0.998 | D | 0.552 | neutral | None | None | None | None | N |
A/I | 0.3661 | ambiguous | 0.2617 | benign | -0.288 | Destabilizing | 0.78 | D | 0.504 | neutral | None | None | None | None | N |
A/K | 0.7829 | likely_pathogenic | 0.6991 | pathogenic | -0.778 | Destabilizing | 0.087 | N | 0.372 | neutral | None | None | None | None | N |
A/L | 0.3708 | ambiguous | 0.2763 | benign | -0.288 | Destabilizing | 0.593 | D | 0.508 | neutral | None | None | None | None | N |
A/M | 0.3909 | ambiguous | 0.2998 | benign | -0.377 | Destabilizing | 0.98 | D | 0.533 | neutral | None | None | None | None | N |
A/N | 0.4627 | ambiguous | 0.3714 | ambiguous | -0.496 | Destabilizing | 0.437 | N | 0.585 | neutral | None | None | None | None | N |
A/P | 0.9748 | likely_pathogenic | 0.9506 | pathogenic | -0.355 | Destabilizing | 0.969 | D | 0.563 | neutral | D | 0.526210615 | None | None | N |
A/Q | 0.5779 | likely_pathogenic | 0.5048 | ambiguous | -0.677 | Destabilizing | 0.961 | D | 0.567 | neutral | None | None | None | None | N |
A/R | 0.6995 | likely_pathogenic | 0.6229 | pathogenic | -0.424 | Destabilizing | 0.925 | D | 0.567 | neutral | None | None | None | None | N |
A/S | 0.1163 | likely_benign | 0.1001 | benign | -0.878 | Destabilizing | 0.095 | N | 0.487 | neutral | N | 0.492582545 | None | None | N |
A/T | 0.1135 | likely_benign | 0.0893 | benign | -0.852 | Destabilizing | 0.483 | N | 0.492 | neutral | D | 0.532944901 | None | None | N |
A/V | 0.1773 | likely_benign | 0.1298 | benign | -0.355 | Destabilizing | 0.003 | N | 0.161 | neutral | N | 0.500600409 | None | None | N |
A/W | 0.9103 | likely_pathogenic | 0.8632 | pathogenic | -1.056 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
A/Y | 0.7038 | likely_pathogenic | 0.6082 | pathogenic | -0.668 | Destabilizing | 0.994 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.