Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8632 | 26119;26120;26121 | chr2:178715520;178715519;178715518 | chr2:179580247;179580246;179580245 |
N2AB | 8315 | 25168;25169;25170 | chr2:178715520;178715519;178715518 | chr2:179580247;179580246;179580245 |
N2A | 7388 | 22387;22388;22389 | chr2:178715520;178715519;178715518 | chr2:179580247;179580246;179580245 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.997 | D | 0.434 | 0.368 | 0.388812400583 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.134 | likely_benign | 0.1372 | benign | -0.645 | Destabilizing | 0.559 | D | 0.417 | neutral | None | None | None | None | N |
S/C | 0.2301 | likely_benign | 0.2092 | benign | -0.386 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.509903559 | None | None | N |
S/D | 0.5295 | ambiguous | 0.5197 | ambiguous | 0.22 | Stabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
S/E | 0.6955 | likely_pathogenic | 0.6972 | pathogenic | 0.145 | Stabilizing | 0.997 | D | 0.484 | neutral | None | None | None | None | N |
S/F | 0.2733 | likely_benign | 0.2785 | benign | -1.13 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/G | 0.1364 | likely_benign | 0.1335 | benign | -0.789 | Destabilizing | 0.997 | D | 0.434 | neutral | D | 0.534489047 | None | None | N |
S/H | 0.3735 | ambiguous | 0.3429 | ambiguous | -1.247 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
S/I | 0.2005 | likely_benign | 0.2069 | benign | -0.388 | Destabilizing | 0.983 | D | 0.607 | neutral | N | 0.503471551 | None | None | N |
S/K | 0.7006 | likely_pathogenic | 0.6966 | pathogenic | -0.535 | Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
S/L | 0.1784 | likely_benign | 0.1942 | benign | -0.388 | Destabilizing | 0.987 | D | 0.545 | neutral | None | None | None | None | N |
S/M | 0.304 | likely_benign | 0.3168 | benign | -0.082 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
S/N | 0.1401 | likely_benign | 0.1399 | benign | -0.265 | Destabilizing | 0.988 | D | 0.552 | neutral | N | 0.490861025 | None | None | N |
S/P | 0.8564 | likely_pathogenic | 0.8858 | pathogenic | -0.444 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Q | 0.5694 | likely_pathogenic | 0.5467 | ambiguous | -0.518 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | N |
S/R | 0.5837 | likely_pathogenic | 0.5743 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.522823908 | None | None | N |
S/T | 0.1056 | likely_benign | 0.1073 | benign | -0.413 | Destabilizing | 0.786 | D | 0.438 | neutral | D | 0.523301123 | None | None | N |
S/V | 0.24 | likely_benign | 0.2404 | benign | -0.444 | Destabilizing | 0.438 | N | 0.526 | neutral | None | None | None | None | N |
S/W | 0.5185 | ambiguous | 0.5026 | ambiguous | -1.066 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
S/Y | 0.2708 | likely_benign | 0.2654 | benign | -0.817 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.