Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8633 | 26122;26123;26124 | chr2:178715517;178715516;178715515 | chr2:179580244;179580243;179580242 |
N2AB | 8316 | 25171;25172;25173 | chr2:178715517;178715516;178715515 | chr2:179580244;179580243;179580242 |
N2A | 7389 | 22390;22391;22392 | chr2:178715517;178715516;178715515 | chr2:179580244;179580243;179580242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs776980958 | -1.412 | 0.606 | N | 0.501 | 0.164 | 0.21279746466 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
S/G | rs776980958 | -1.412 | 0.606 | N | 0.501 | 0.164 | 0.21279746466 | gnomAD-4.0.0 | 1.59484E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1236 | likely_benign | 0.103 | benign | -0.926 | Destabilizing | 0.017 | N | 0.365 | neutral | None | None | None | None | N |
S/C | 0.0882 | likely_benign | 0.0746 | benign | -0.493 | Destabilizing | 0.001 | N | 0.398 | neutral | N | 0.417965957 | None | None | N |
S/D | 0.9058 | likely_pathogenic | 0.8586 | pathogenic | -0.109 | Destabilizing | 0.727 | D | 0.553 | neutral | None | None | None | None | N |
S/E | 0.9522 | likely_pathogenic | 0.9269 | pathogenic | -0.08 | Destabilizing | 0.789 | D | 0.561 | neutral | None | None | None | None | N |
S/F | 0.4797 | ambiguous | 0.389 | ambiguous | -1.035 | Destabilizing | 0.986 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/G | 0.1932 | likely_benign | 0.1525 | benign | -1.208 | Destabilizing | 0.606 | D | 0.501 | neutral | N | 0.520207677 | None | None | N |
S/H | 0.7844 | likely_pathogenic | 0.7106 | pathogenic | -1.576 | Destabilizing | 0.995 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/I | 0.3372 | likely_benign | 0.275 | benign | -0.269 | Destabilizing | 0.883 | D | 0.665 | neutral | N | 0.488467941 | None | None | N |
S/K | 0.9838 | likely_pathogenic | 0.9726 | pathogenic | -0.551 | Destabilizing | 0.909 | D | 0.548 | neutral | None | None | None | None | N |
S/L | 0.2149 | likely_benign | 0.1742 | benign | -0.269 | Destabilizing | 0.673 | D | 0.648 | neutral | None | None | None | None | N |
S/M | 0.3821 | ambiguous | 0.3172 | benign | 0.035 | Stabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/N | 0.452 | ambiguous | 0.3631 | ambiguous | -0.574 | Destabilizing | 0.191 | N | 0.557 | neutral | N | 0.488467941 | None | None | N |
S/P | 0.9623 | likely_pathogenic | 0.9471 | pathogenic | -0.454 | Destabilizing | 0.844 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/Q | 0.9101 | likely_pathogenic | 0.8768 | pathogenic | -0.67 | Destabilizing | 0.986 | D | 0.668 | neutral | None | None | None | None | N |
S/R | 0.9616 | likely_pathogenic | 0.9378 | pathogenic | -0.52 | Destabilizing | 0.982 | D | 0.733 | prob.delet. | D | 0.524536061 | None | None | N |
S/T | 0.0918 | likely_benign | 0.0793 | benign | -0.625 | Destabilizing | None | N | 0.195 | neutral | N | 0.467199911 | None | None | N |
S/V | 0.295 | likely_benign | 0.2405 | benign | -0.454 | Destabilizing | 0.435 | N | 0.65 | neutral | None | None | None | None | N |
S/W | 0.7518 | likely_pathogenic | 0.6699 | pathogenic | -0.975 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/Y | 0.4694 | ambiguous | 0.3765 | ambiguous | -0.711 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.