Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8634 | 26125;26126;26127 | chr2:178715514;178715513;178715512 | chr2:179580241;179580240;179580239 |
N2AB | 8317 | 25174;25175;25176 | chr2:178715514;178715513;178715512 | chr2:179580241;179580240;179580239 |
N2A | 7390 | 22393;22394;22395 | chr2:178715514;178715513;178715512 | chr2:179580241;179580240;179580239 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs769050572 | -0.212 | 0.827 | D | 0.771 | 0.519 | 0.628150982837 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.67094E-04 | None | 0 | None | 0 | 0 | 0 |
S/C | rs769050572 | -0.212 | 0.827 | D | 0.771 | 0.519 | 0.628150982837 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/C | rs769050572 | -0.212 | 0.827 | D | 0.771 | 0.519 | 0.628150982837 | gnomAD-4.0.0 | 3.10148E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11488E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.123 | likely_benign | 0.1144 | benign | -0.608 | Destabilizing | 0.004 | N | 0.483 | neutral | None | None | None | None | N |
S/C | 0.2948 | likely_benign | 0.2246 | benign | -0.334 | Destabilizing | 0.827 | D | 0.771 | deleterious | D | 0.543327365 | None | None | N |
S/D | 0.7937 | likely_pathogenic | 0.718 | pathogenic | -0.435 | Destabilizing | 0.191 | N | 0.599 | neutral | None | None | None | None | N |
S/E | 0.8313 | likely_pathogenic | 0.7542 | pathogenic | -0.519 | Destabilizing | 0.248 | N | 0.584 | neutral | None | None | None | None | N |
S/F | 0.3238 | likely_benign | 0.2758 | benign | -1.31 | Destabilizing | 0.862 | D | 0.812 | deleterious | None | None | None | None | N |
S/G | 0.1808 | likely_benign | 0.1426 | benign | -0.709 | Destabilizing | 0.248 | N | 0.544 | neutral | N | 0.505028487 | None | None | N |
S/H | 0.5917 | likely_pathogenic | 0.4812 | ambiguous | -1.397 | Destabilizing | 0.986 | D | 0.766 | deleterious | None | None | None | None | N |
S/I | 0.3449 | ambiguous | 0.2977 | benign | -0.459 | Destabilizing | 0.538 | D | 0.791 | deleterious | N | 0.51047299 | None | None | N |
S/K | 0.8702 | likely_pathogenic | 0.7773 | pathogenic | -0.5 | Destabilizing | 0.468 | N | 0.584 | neutral | None | None | None | None | N |
S/L | 0.1719 | likely_benign | 0.1573 | benign | -0.459 | Destabilizing | 0.306 | N | 0.688 | prob.neutral | None | None | None | None | N |
S/M | 0.3343 | likely_benign | 0.3103 | benign | 0.104 | Stabilizing | 0.959 | D | 0.771 | deleterious | None | None | None | None | N |
S/N | 0.346 | ambiguous | 0.284 | benign | -0.309 | Destabilizing | 0.02 | N | 0.584 | neutral | N | 0.488556847 | None | None | N |
S/P | 0.7751 | likely_pathogenic | 0.7002 | pathogenic | -0.483 | Destabilizing | 0.626 | D | 0.775 | deleterious | None | None | None | None | N |
S/Q | 0.7373 | likely_pathogenic | 0.6317 | pathogenic | -0.683 | Destabilizing | 0.862 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/R | 0.804 | likely_pathogenic | 0.6842 | pathogenic | -0.282 | Destabilizing | 0.7 | D | 0.781 | deleterious | N | 0.486897779 | None | None | N |
S/T | 0.1119 | likely_benign | 0.0968 | benign | -0.373 | Destabilizing | None | N | 0.414 | neutral | N | 0.501677844 | None | None | N |
S/V | 0.3093 | likely_benign | 0.2662 | benign | -0.483 | Destabilizing | 0.366 | N | 0.742 | deleterious | None | None | None | None | N |
S/W | 0.6024 | likely_pathogenic | 0.4933 | ambiguous | -1.274 | Destabilizing | 0.986 | D | 0.762 | deleterious | None | None | None | None | N |
S/Y | 0.3547 | ambiguous | 0.29 | benign | -0.988 | Destabilizing | 0.862 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.