Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8635 | 26128;26129;26130 | chr2:178715511;178715510;178715509 | chr2:179580238;179580237;179580236 |
N2AB | 8318 | 25177;25178;25179 | chr2:178715511;178715510;178715509 | chr2:179580238;179580237;179580236 |
N2A | 7391 | 22396;22397;22398 | chr2:178715511;178715510;178715509 | chr2:179580238;179580237;179580236 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.934 | N | 0.572 | 0.154 | 0.220303561663 | gnomAD-4.0.0 | 1.20039E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
T/I | rs1005082166 | None | 1.0 | N | 0.825 | 0.315 | 0.475192790171 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1005082166 | None | 1.0 | N | 0.825 | 0.315 | 0.475192790171 | gnomAD-4.0.0 | 1.24085E-06 | None | None | None | None | N | None | 1.33636E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48675E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0927 | likely_benign | 0.0875 | benign | -1.395 | Destabilizing | 0.934 | D | 0.572 | neutral | N | 0.4478005 | None | None | N |
T/C | 0.4992 | ambiguous | 0.4896 | ambiguous | -1.437 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
T/D | 0.9154 | likely_pathogenic | 0.8708 | pathogenic | -1.484 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
T/E | 0.897 | likely_pathogenic | 0.8579 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
T/F | 0.5068 | ambiguous | 0.4789 | ambiguous | -1.558 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
T/G | 0.4416 | ambiguous | 0.3745 | ambiguous | -1.723 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/H | 0.7408 | likely_pathogenic | 0.6974 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/I | 0.2262 | likely_benign | 0.2438 | benign | -0.555 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.50515808 | None | None | N |
T/K | 0.8485 | likely_pathogenic | 0.7895 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.513622861 | None | None | N |
T/L | 0.1872 | likely_benign | 0.1821 | benign | -0.555 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/M | 0.145 | likely_benign | 0.15 | benign | -0.402 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
T/N | 0.451 | ambiguous | 0.4141 | ambiguous | -1.299 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/P | 0.7661 | likely_pathogenic | 0.702 | pathogenic | -0.807 | Destabilizing | 0.999 | D | 0.827 | deleterious | D | 0.525232656 | None | None | N |
T/Q | 0.7596 | likely_pathogenic | 0.7033 | pathogenic | -1.261 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
T/R | 0.7365 | likely_pathogenic | 0.6665 | pathogenic | -0.727 | Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.513622861 | None | None | N |
T/S | 0.1939 | likely_benign | 0.1734 | benign | -1.583 | Destabilizing | 0.51 | D | 0.386 | neutral | N | 0.471605654 | None | None | N |
T/V | 0.166 | likely_benign | 0.175 | benign | -0.807 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
T/W | 0.9112 | likely_pathogenic | 0.8949 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
T/Y | 0.6946 | likely_pathogenic | 0.6681 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.