Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8638 | 26137;26138;26139 | chr2:178715502;178715501;178715500 | chr2:179580229;179580228;179580227 |
N2AB | 8321 | 25186;25187;25188 | chr2:178715502;178715501;178715500 | chr2:179580229;179580228;179580227 |
N2A | 7394 | 22405;22406;22407 | chr2:178715502;178715501;178715500 | chr2:179580229;179580228;179580227 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.447 | N | 0.275 | 0.059 | 0.197625483188 | gnomAD-4.0.0 | 1.59765E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87396E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3962 | ambiguous | 0.2985 | benign | -0.53 | Destabilizing | 0.181 | N | 0.412 | neutral | None | None | None | None | N |
K/C | 0.7289 | likely_pathogenic | 0.65 | pathogenic | -0.662 | Destabilizing | 0.989 | D | 0.447 | neutral | None | None | None | None | N |
K/D | 0.6631 | likely_pathogenic | 0.5635 | ambiguous | 0.297 | Stabilizing | 0.517 | D | 0.393 | neutral | None | None | None | None | N |
K/E | 0.2136 | likely_benign | 0.1632 | benign | 0.389 | Stabilizing | 0.091 | N | 0.286 | neutral | N | 0.49080749 | None | None | N |
K/F | 0.7201 | likely_pathogenic | 0.629 | pathogenic | -0.388 | Destabilizing | 0.599 | D | 0.489 | neutral | None | None | None | None | N |
K/G | 0.6929 | likely_pathogenic | 0.568 | pathogenic | -0.854 | Destabilizing | 0.517 | D | 0.437 | neutral | None | None | None | None | N |
K/H | 0.2779 | likely_benign | 0.2401 | benign | -1.15 | Destabilizing | 0.759 | D | 0.435 | neutral | None | None | None | None | N |
K/I | 0.2265 | likely_benign | 0.1911 | benign | 0.289 | Stabilizing | None | N | 0.421 | neutral | N | 0.451694528 | None | None | N |
K/L | 0.2963 | likely_benign | 0.2372 | benign | 0.289 | Stabilizing | 0.006 | N | 0.433 | neutral | None | None | None | None | N |
K/M | 0.181 | likely_benign | 0.1508 | benign | 0.152 | Stabilizing | 0.31 | N | 0.439 | neutral | None | None | None | None | N |
K/N | 0.4627 | ambiguous | 0.381 | ambiguous | -0.201 | Destabilizing | 0.447 | N | 0.275 | neutral | N | 0.499024328 | None | None | N |
K/P | 0.9399 | likely_pathogenic | 0.8763 | pathogenic | 0.046 | Stabilizing | 0.884 | D | 0.449 | neutral | None | None | None | None | N |
K/Q | 0.1338 | likely_benign | 0.1176 | benign | -0.324 | Destabilizing | 0.089 | N | 0.392 | neutral | N | 0.487940543 | None | None | N |
K/R | 0.0925 | likely_benign | 0.0829 | benign | -0.359 | Destabilizing | None | N | 0.214 | neutral | N | 0.465970547 | None | None | N |
K/S | 0.4684 | ambiguous | 0.3766 | ambiguous | -0.964 | Destabilizing | 0.017 | N | 0.075 | neutral | None | None | None | None | N |
K/T | 0.1378 | likely_benign | 0.1114 | benign | -0.667 | Destabilizing | 0.001 | N | 0.155 | neutral | N | 0.407690248 | None | None | N |
K/V | 0.2353 | likely_benign | 0.1954 | benign | 0.046 | Stabilizing | 0.003 | N | 0.42 | neutral | None | None | None | None | N |
K/W | 0.7341 | likely_pathogenic | 0.6545 | pathogenic | -0.218 | Destabilizing | 0.992 | D | 0.511 | neutral | None | None | None | None | N |
K/Y | 0.6049 | likely_pathogenic | 0.519 | ambiguous | 0.095 | Stabilizing | 0.519 | D | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.