Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8639 | 26140;26141;26142 | chr2:178715499;178715498;178715497 | chr2:179580226;179580225;179580224 |
N2AB | 8322 | 25189;25190;25191 | chr2:178715499;178715498;178715497 | chr2:179580226;179580225;179580224 |
N2A | 7395 | 22408;22409;22410 | chr2:178715499;178715498;178715497 | chr2:179580226;179580225;179580224 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1427227571 | None | 0.012 | N | 0.481 | 0.369 | 0.430239905395 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
V/I | rs1427227571 | None | 0.012 | N | 0.481 | 0.369 | 0.430239905395 | gnomAD-4.0.0 | 1.371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52283E-05 | None | 0 | 0 | 9.01115E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7901 | likely_pathogenic | 0.7014 | pathogenic | -2.091 | Highly Destabilizing | 0.974 | D | 0.648 | neutral | D | 0.643824282 | None | None | N |
V/C | 0.973 | likely_pathogenic | 0.9613 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
V/D | 0.996 | likely_pathogenic | 0.9901 | pathogenic | -2.592 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.644429695 | None | None | N |
V/E | 0.9858 | likely_pathogenic | 0.9679 | pathogenic | -2.471 | Highly Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/F | 0.8855 | likely_pathogenic | 0.8193 | pathogenic | -1.394 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | D | 0.643824282 | None | None | N |
V/G | 0.8574 | likely_pathogenic | 0.7731 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.644429695 | None | None | N |
V/H | 0.997 | likely_pathogenic | 0.9934 | pathogenic | -2.0 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/I | 0.1162 | likely_benign | 0.1106 | benign | -0.971 | Destabilizing | 0.012 | N | 0.481 | neutral | N | 0.508713288 | None | None | N |
V/K | 0.9926 | likely_pathogenic | 0.9823 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/L | 0.7605 | likely_pathogenic | 0.6608 | pathogenic | -0.971 | Destabilizing | 0.753 | D | 0.66 | neutral | D | 0.609535353 | None | None | N |
V/M | 0.7491 | likely_pathogenic | 0.6377 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
V/N | 0.9815 | likely_pathogenic | 0.9581 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
V/P | 0.9777 | likely_pathogenic | 0.9668 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/Q | 0.9876 | likely_pathogenic | 0.973 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/R | 0.9866 | likely_pathogenic | 0.9701 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/S | 0.9363 | likely_pathogenic | 0.8842 | pathogenic | -2.475 | Highly Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/T | 0.8733 | likely_pathogenic | 0.7892 | pathogenic | -2.233 | Highly Destabilizing | 0.976 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.9975 | likely_pathogenic | 0.9945 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/Y | 0.987 | likely_pathogenic | 0.974 | pathogenic | -1.399 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.