Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8644 | 26155;26156;26157 | chr2:178715256;178715255;178715254 | chr2:179579983;179579982;179579981 |
N2AB | 8327 | 25204;25205;25206 | chr2:178715256;178715255;178715254 | chr2:179579983;179579982;179579981 |
N2A | 7400 | 22423;22424;22425 | chr2:178715256;178715255;178715254 | chr2:179579983;179579982;179579981 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs779643078 | -1.371 | None | N | 0.202 | 0.077 | 0.299427821978 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.56E-05 | None | 0 | 0 | 0 |
I/T | rs779643078 | -1.371 | None | N | 0.202 | 0.077 | 0.299427821978 | gnomAD-4.0.0 | 1.62272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4821E-05 | 0 |
I/V | rs2077304950 | None | None | N | 0.067 | 0.172 | 0.0806252709748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1282 | likely_benign | 0.1141 | benign | -1.269 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
I/C | 0.4182 | ambiguous | 0.4026 | ambiguous | -0.853 | Destabilizing | 0.245 | N | 0.409 | neutral | None | None | None | None | N |
I/D | 0.3207 | likely_benign | 0.2956 | benign | -0.464 | Destabilizing | 0.044 | N | 0.455 | neutral | None | None | None | None | N |
I/E | 0.2617 | likely_benign | 0.2353 | benign | -0.448 | Destabilizing | 0.009 | N | 0.397 | neutral | None | None | None | None | N |
I/F | 0.1013 | likely_benign | 0.0942 | benign | -0.724 | Destabilizing | 0.017 | N | 0.329 | neutral | N | 0.445304487 | None | None | N |
I/G | 0.2915 | likely_benign | 0.2591 | benign | -1.585 | Destabilizing | 0.009 | N | 0.307 | neutral | None | None | None | None | N |
I/H | 0.2031 | likely_benign | 0.1809 | benign | -0.667 | Destabilizing | 0.245 | N | 0.477 | neutral | None | None | None | None | N |
I/K | 0.1601 | likely_benign | 0.14 | benign | -0.819 | Destabilizing | 0.009 | N | 0.371 | neutral | None | None | None | None | N |
I/L | 0.0783 | likely_benign | 0.0755 | benign | -0.485 | Destabilizing | None | N | 0.066 | neutral | N | 0.453307894 | None | None | N |
I/M | 0.0889 | likely_benign | 0.0808 | benign | -0.517 | Destabilizing | None | N | 0.217 | neutral | N | 0.466410478 | None | None | N |
I/N | 0.1071 | likely_benign | 0.1053 | benign | -0.71 | Destabilizing | 0.017 | N | 0.498 | neutral | N | 0.442186824 | None | None | N |
I/P | 0.8442 | likely_pathogenic | 0.8249 | pathogenic | -0.714 | Destabilizing | 0.044 | N | 0.513 | neutral | None | None | None | None | N |
I/Q | 0.1757 | likely_benign | 0.1515 | benign | -0.819 | Destabilizing | 0.044 | N | 0.558 | neutral | None | None | None | None | N |
I/R | 0.1112 | likely_benign | 0.0992 | benign | -0.3 | Destabilizing | 0.044 | N | 0.539 | neutral | None | None | None | None | N |
I/S | 0.1006 | likely_benign | 0.0938 | benign | -1.344 | Destabilizing | None | N | 0.243 | neutral | N | 0.358453506 | None | None | N |
I/T | 0.0941 | likely_benign | 0.0872 | benign | -1.202 | Destabilizing | None | N | 0.202 | neutral | N | 0.413653428 | None | None | N |
I/V | 0.0549 | likely_benign | 0.0542 | benign | -0.714 | Destabilizing | None | N | 0.067 | neutral | N | 0.357221355 | None | None | N |
I/W | 0.6234 | likely_pathogenic | 0.5752 | pathogenic | -0.786 | Destabilizing | 0.788 | D | 0.484 | neutral | None | None | None | None | N |
I/Y | 0.2861 | likely_benign | 0.2666 | benign | -0.554 | Destabilizing | 0.085 | N | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.