Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC864626161;26162;26163 chr2:178715250;178715249;178715248chr2:179579977;179579976;179579975
N2AB832925210;25211;25212 chr2:178715250;178715249;178715248chr2:179579977;179579976;179579975
N2A740222429;22430;22431 chr2:178715250;178715249;178715248chr2:179579977;179579976;179579975
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Ig-72
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.571
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs72648987 -0.197 0.001 N 0.207 0.084 None gnomAD-2.1.1 1.65369E-02 None None None None I None 3.87565E-03 1.41441E-02 None 1.25052E-02 1.04998E-04 None 1.49592E-02 None 2.11205E-02 2.17043E-02 1.96136E-02
R/C rs72648987 -0.197 0.001 N 0.207 0.084 None gnomAD-3.1.2 1.65713E-02 None None None None I None 4.66116E-03 2.50492E-02 3.28947E-03 1.09447E-02 1.9305E-04 None 2.10576E-02 1.89873E-02 2.28282E-02 1.66182E-02 1.96737E-02
R/C rs72648987 -0.197 0.001 N 0.207 0.084 None 1000 genomes 9.38498E-03 None None None None I None 0 1.59E-02 None None 0 2.58E-02 None None None 1.02E-02 None
R/C rs72648987 -0.197 0.001 N 0.207 0.084 None gnomAD-4.0.0 1.88575E-02 None None None None I None 4.02813E-03 1.75393E-02 None 1.19703E-02 8.94334E-05 None 2.25869E-02 1.83596E-02 2.0923E-02 1.49913E-02 1.7455E-02
R/H rs144587343 -0.836 None N 0.142 0.06 None gnomAD-2.1.1 7.37E-05 None None None None I None 4.16458E-04 2.99E-05 None 0 0 None 1.41064E-04 None 0 3.2E-05 1.46284E-04
R/H rs144587343 -0.836 None N 0.142 0.06 None gnomAD-3.1.2 1.64619E-04 None None None None I None 3.87203E-04 1.3113E-04 0 0 0 None 0 0 7.36E-05 2.07469E-04 4.79846E-04
R/H rs144587343 -0.836 None N 0.142 0.06 None 1000 genomes 3.99361E-04 None None None None I None 1.5E-03 0 None None 0 0 None None None 0 None
R/H rs144587343 -0.836 None N 0.142 0.06 None gnomAD-4.0.0 1.07994E-04 None None None None I None 4.31034E-04 6.88373E-05 None 0 2.23444E-05 None 0 0 1.03867E-04 7.88555E-05 1.13129E-04
R/L rs144587343 None None N 0.089 0.078 0.144782658237 gnomAD-3.1.2 6.58E-06 None None None None I None 0 6.56E-05 0 0 0 None 0 0 0 0 0
R/L rs144587343 None None N 0.089 0.078 0.144782658237 gnomAD-4.0.0 1.24858E-06 None None None None I None 0 1.72153E-05 None 0 0 None 0 0 8.51362E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.1773 likely_benign 0.1593 benign -0.061 Destabilizing 0.004 N 0.182 neutral None None None None I
R/C 0.0884 likely_benign 0.0988 benign -0.121 Destabilizing 0.001 N 0.207 neutral N 0.469599059 None None I
R/D 0.3789 ambiguous 0.3853 ambiguous -0.073 Destabilizing 0.02 N 0.392 neutral None None None None I
R/E 0.1947 likely_benign 0.1931 benign 0.011 Stabilizing 0.003 N 0.185 neutral None None None None I
R/F 0.2457 likely_benign 0.2391 benign -0.134 Destabilizing 0.008 N 0.443 neutral None None None None I
R/G 0.121 likely_benign 0.1131 benign -0.3 Destabilizing 0.016 N 0.25 neutral N 0.463499806 None None I
R/H 0.0706 likely_benign 0.0741 benign -0.807 Destabilizing None N 0.142 neutral N 0.4694257 None None I
R/I 0.1022 likely_benign 0.1012 benign 0.547 Stabilizing None N 0.187 neutral None None None None I
R/K 0.0846 likely_benign 0.0844 benign -0.156 Destabilizing 0.001 N 0.225 neutral None None None None I
R/L 0.1017 likely_benign 0.1053 benign 0.547 Stabilizing None N 0.089 neutral N 0.400891122 None None I
R/M 0.1398 likely_benign 0.135 benign 0.086 Stabilizing 0.056 N 0.298 neutral None None None None I
R/N 0.2561 likely_benign 0.2553 benign 0.165 Stabilizing 0.02 N 0.217 neutral None None None None I
R/P 0.5788 likely_pathogenic 0.5899 pathogenic 0.366 Stabilizing 0.072 N 0.447 neutral N 0.482637353 None None I
R/Q 0.0716 likely_benign 0.074 benign 0.064 Stabilizing 0.029 N 0.31 neutral None None None None I
R/S 0.1713 likely_benign 0.156 benign -0.23 Destabilizing None N 0.121 neutral N 0.404702218 None None I
R/T 0.1008 likely_benign 0.0908 benign 0.002 Stabilizing None N 0.083 neutral None None None None I
R/V 0.1491 likely_benign 0.1442 benign 0.366 Stabilizing None N 0.153 neutral None None None None I
R/W 0.0955 likely_benign 0.0982 benign -0.102 Destabilizing 0.618 D 0.287 neutral None None None None I
R/Y 0.1651 likely_benign 0.1738 benign 0.276 Stabilizing None N 0.157 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.