Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8649 | 26170;26171;26172 | chr2:178715241;178715240;178715239 | chr2:179579968;179579967;179579966 |
N2AB | 8332 | 25219;25220;25221 | chr2:178715241;178715240;178715239 | chr2:179579968;179579967;179579966 |
N2A | 7405 | 22438;22439;22440 | chr2:178715241;178715240;178715239 | chr2:179579968;179579967;179579966 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1414275142 | -0.411 | 0.999 | N | 0.675 | 0.393 | 0.532359089423 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.04493E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs1414275142 | -0.411 | 0.999 | N | 0.675 | 0.393 | 0.532359089423 | gnomAD-4.0.0 | 1.61329E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.84966E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2528 | likely_benign | 0.2905 | benign | -1.757 | Destabilizing | 0.288 | N | 0.329 | neutral | N | 0.503235655 | None | None | I |
P/C | 0.8001 | likely_pathogenic | 0.8365 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/D | 0.9548 | likely_pathogenic | 0.9695 | pathogenic | -1.945 | Destabilizing | 0.986 | D | 0.657 | neutral | None | None | None | None | I |
P/E | 0.891 | likely_pathogenic | 0.9268 | pathogenic | -1.917 | Destabilizing | 0.982 | D | 0.63 | neutral | None | None | None | None | I |
P/F | 0.7866 | likely_pathogenic | 0.8255 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/G | 0.7674 | likely_pathogenic | 0.8246 | pathogenic | -2.102 | Highly Destabilizing | 0.99 | D | 0.595 | neutral | None | None | None | None | I |
P/H | 0.7623 | likely_pathogenic | 0.8241 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.665 | neutral | D | 0.531001148 | None | None | I |
P/I | 0.4255 | ambiguous | 0.456 | ambiguous | -0.871 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/K | 0.917 | likely_pathogenic | 0.9439 | pathogenic | -1.552 | Destabilizing | 0.996 | D | 0.612 | neutral | None | None | None | None | I |
P/L | 0.1822 | likely_benign | 0.2058 | benign | -0.871 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.469972779 | None | None | I |
P/M | 0.4698 | ambiguous | 0.509 | ambiguous | -0.456 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/N | 0.8652 | likely_pathogenic | 0.902 | pathogenic | -1.248 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | I |
P/Q | 0.7189 | likely_pathogenic | 0.792 | pathogenic | -1.383 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | I |
P/R | 0.8304 | likely_pathogenic | 0.8776 | pathogenic | -1.06 | Destabilizing | 0.729 | D | 0.398 | neutral | D | 0.530494169 | None | None | I |
P/S | 0.588 | likely_pathogenic | 0.6694 | pathogenic | -1.68 | Destabilizing | 0.981 | D | 0.613 | neutral | N | 0.503742634 | None | None | I |
P/T | 0.3657 | ambiguous | 0.4229 | ambiguous | -1.562 | Destabilizing | 0.994 | D | 0.634 | neutral | N | 0.512136425 | None | None | I |
P/V | 0.3675 | ambiguous | 0.3911 | ambiguous | -1.137 | Destabilizing | 0.997 | D | 0.632 | neutral | None | None | None | None | I |
P/W | 0.931 | likely_pathogenic | 0.9517 | pathogenic | -1.609 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/Y | 0.8514 | likely_pathogenic | 0.893 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.