Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8651 | 26176;26177;26178 | chr2:178715235;178715234;178715233 | chr2:179579962;179579961;179579960 |
N2AB | 8334 | 25225;25226;25227 | chr2:178715235;178715234;178715233 | chr2:179579962;179579961;179579960 |
N2A | 7407 | 22444;22445;22446 | chr2:178715235;178715234;178715233 | chr2:179579962;179579961;179579960 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs368758220 | 0.138 | 0.003 | N | 0.307 | 0.195 | None | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 6.5E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs368758220 | 0.138 | 0.003 | N | 0.307 | 0.195 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs368758220 | 0.138 | 0.003 | N | 0.307 | 0.195 | None | gnomAD-4.0.0 | 2.58533E-06 | None | None | None | None | I | None | 3.41087E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0652 | likely_benign | 0.0707 | benign | -0.44 | Destabilizing | None | N | 0.189 | neutral | N | 0.511600397 | None | None | I |
P/C | 0.2734 | likely_benign | 0.3236 | benign | -0.5 | Destabilizing | 0.752 | D | 0.457 | neutral | None | None | None | None | I |
P/D | 0.2786 | likely_benign | 0.3011 | benign | -0.413 | Destabilizing | 0.089 | N | 0.353 | neutral | None | None | None | None | I |
P/E | 0.2139 | likely_benign | 0.233 | benign | -0.528 | Destabilizing | 0.042 | N | 0.343 | neutral | None | None | None | None | I |
P/F | 0.2463 | likely_benign | 0.2741 | benign | -0.689 | Destabilizing | 0.831 | D | 0.451 | neutral | None | None | None | None | I |
P/G | 0.1967 | likely_benign | 0.2153 | benign | -0.571 | Destabilizing | 0.124 | N | 0.33 | neutral | None | None | None | None | I |
P/H | 0.1201 | likely_benign | 0.1326 | benign | -0.173 | Destabilizing | 0.97 | D | 0.426 | neutral | N | 0.476354037 | None | None | I |
P/I | 0.1663 | likely_benign | 0.1875 | benign | -0.244 | Destabilizing | 0.413 | N | 0.414 | neutral | None | None | None | None | I |
P/K | 0.1873 | likely_benign | 0.2045 | benign | -0.44 | Destabilizing | 0.585 | D | 0.326 | neutral | None | None | None | None | I |
P/L | 0.0892 | likely_benign | 0.0987 | benign | -0.244 | Destabilizing | 0.003 | N | 0.307 | neutral | N | 0.452805278 | None | None | I |
P/M | 0.1925 | likely_benign | 0.2141 | benign | -0.326 | Destabilizing | 0.649 | D | 0.416 | neutral | None | None | None | None | I |
P/N | 0.191 | likely_benign | 0.2102 | benign | -0.116 | Destabilizing | 0.38 | N | 0.421 | neutral | None | None | None | None | I |
P/Q | 0.1109 | likely_benign | 0.1217 | benign | -0.371 | Destabilizing | 0.789 | D | 0.373 | neutral | None | None | None | None | I |
P/R | 0.1217 | likely_benign | 0.1299 | benign | 0.085 | Stabilizing | 0.788 | D | 0.429 | neutral | N | 0.457742802 | None | None | I |
P/S | 0.0885 | likely_benign | 0.1008 | benign | -0.436 | Destabilizing | 0.011 | N | 0.208 | neutral | N | 0.462382298 | None | None | I |
P/T | 0.0826 | likely_benign | 0.0937 | benign | -0.455 | Destabilizing | 0.062 | N | 0.237 | neutral | N | 0.510906963 | None | None | I |
P/V | 0.1275 | likely_benign | 0.1424 | benign | -0.275 | Destabilizing | 0.001 | N | 0.257 | neutral | None | None | None | None | I |
P/W | 0.3799 | ambiguous | 0.4241 | ambiguous | -0.781 | Destabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | I |
P/Y | 0.2396 | likely_benign | 0.261 | benign | -0.48 | Destabilizing | 0.909 | D | 0.458 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.