Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8657 | 26194;26195;26196 | chr2:178715217;178715216;178715215 | chr2:179579944;179579943;179579942 |
N2AB | 8340 | 25243;25244;25245 | chr2:178715217;178715216;178715215 | chr2:179579944;179579943;179579942 |
N2A | 7413 | 22462;22463;22464 | chr2:178715217;178715216;178715215 | chr2:179579944;179579943;179579942 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs766866317 | None | 0.72 | D | 0.632 | 0.741 | 0.428747304603 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
G/E | rs766866317 | None | 0.99 | D | 0.735 | 0.781 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2341 | likely_benign | 0.2486 | benign | -0.451 | Destabilizing | 0.72 | D | 0.632 | neutral | D | 0.639380999 | None | None | N |
G/C | 0.4844 | ambiguous | 0.5028 | ambiguous | -0.863 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
G/D | 0.2832 | likely_benign | 0.2703 | benign | -0.984 | Destabilizing | 0.962 | D | 0.752 | deleterious | None | None | None | None | N |
G/E | 0.3742 | ambiguous | 0.3655 | ambiguous | -1.152 | Destabilizing | 0.99 | D | 0.735 | prob.delet. | D | 0.575283913 | None | None | N |
G/F | 0.7067 | likely_pathogenic | 0.7459 | pathogenic | -1.204 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
G/H | 0.5769 | likely_pathogenic | 0.5894 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
G/I | 0.5881 | likely_pathogenic | 0.614 | pathogenic | -0.552 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
G/K | 0.6957 | likely_pathogenic | 0.7126 | pathogenic | -0.982 | Destabilizing | 0.986 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/L | 0.6278 | likely_pathogenic | 0.6546 | pathogenic | -0.552 | Destabilizing | 0.993 | D | 0.73 | prob.delet. | None | None | None | None | N |
G/M | 0.6145 | likely_pathogenic | 0.6449 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/N | 0.276 | likely_benign | 0.2723 | benign | -0.595 | Destabilizing | 0.22 | N | 0.453 | neutral | None | None | None | None | N |
G/P | 0.9551 | likely_pathogenic | 0.9617 | pathogenic | -0.485 | Destabilizing | 0.99 | D | 0.769 | deleterious | None | None | None | None | N |
G/Q | 0.5464 | ambiguous | 0.5538 | ambiguous | -0.944 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | N |
G/R | 0.5992 | likely_pathogenic | 0.6099 | pathogenic | -0.443 | Destabilizing | 0.99 | D | 0.767 | deleterious | D | 0.618223655 | None | None | N |
G/S | 0.1524 | likely_benign | 0.1551 | benign | -0.711 | Destabilizing | 0.174 | N | 0.427 | neutral | None | None | None | None | N |
G/T | 0.2937 | likely_benign | 0.3094 | benign | -0.821 | Destabilizing | 0.986 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/V | 0.4209 | ambiguous | 0.4483 | ambiguous | -0.485 | Destabilizing | 0.99 | D | 0.741 | deleterious | D | 0.655803968 | None | None | N |
G/W | 0.5813 | likely_pathogenic | 0.6043 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
G/Y | 0.5196 | ambiguous | 0.5437 | ambiguous | -1.009 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.