Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8665 | 26218;26219;26220 | chr2:178715193;178715192;178715191 | chr2:179579920;179579919;179579918 |
N2AB | 8348 | 25267;25268;25269 | chr2:178715193;178715192;178715191 | chr2:179579920;179579919;179579918 |
N2A | 7421 | 22486;22487;22488 | chr2:178715193;178715192;178715191 | chr2:179579920;179579919;179579918 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1226104343 | -1.425 | 0.932 | N | 0.663 | 0.392 | 0.518147779662 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
E/G | rs1226104343 | -1.425 | 0.932 | N | 0.663 | 0.392 | 0.518147779662 | gnomAD-4.0.0 | 1.91592E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.42875E-05 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3033 | likely_benign | 0.2659 | benign | -1.08 | Destabilizing | 0.804 | D | 0.534 | neutral | N | 0.489428993 | None | None | N |
E/C | 0.9279 | likely_pathogenic | 0.9081 | pathogenic | -0.678 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/D | 0.4241 | ambiguous | 0.3715 | ambiguous | -1.356 | Destabilizing | 0.345 | N | 0.478 | neutral | N | 0.497911689 | None | None | N |
E/F | 0.8339 | likely_pathogenic | 0.787 | pathogenic | -0.512 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.5066 | ambiguous | 0.4287 | ambiguous | -1.487 | Destabilizing | 0.932 | D | 0.663 | neutral | N | 0.500166642 | None | None | N |
E/H | 0.6397 | likely_pathogenic | 0.5753 | pathogenic | -0.852 | Destabilizing | 0.994 | D | 0.594 | neutral | None | None | None | None | N |
E/I | 0.3884 | ambiguous | 0.3453 | ambiguous | 0.055 | Stabilizing | 0.971 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.2941 | likely_benign | 0.259 | benign | -1.076 | Destabilizing | 0.023 | N | 0.43 | neutral | N | 0.514009637 | None | None | N |
E/L | 0.4961 | ambiguous | 0.4423 | ambiguous | 0.055 | Stabilizing | 0.943 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/M | 0.529 | ambiguous | 0.481 | ambiguous | 0.621 | Stabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/N | 0.5985 | likely_pathogenic | 0.5232 | ambiguous | -1.453 | Destabilizing | 0.885 | D | 0.575 | neutral | None | None | None | None | N |
E/P | 0.9749 | likely_pathogenic | 0.9557 | pathogenic | -0.303 | Destabilizing | 0.833 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/Q | 0.177 | likely_benign | 0.1615 | benign | -1.283 | Destabilizing | 0.844 | D | 0.497 | neutral | N | 0.518204735 | None | None | N |
E/R | 0.4625 | ambiguous | 0.4014 | ambiguous | -0.822 | Destabilizing | 0.068 | N | 0.377 | neutral | None | None | None | None | N |
E/S | 0.3871 | ambiguous | 0.3365 | benign | -1.927 | Destabilizing | 0.844 | D | 0.48 | neutral | None | None | None | None | N |
E/T | 0.3732 | ambiguous | 0.3259 | benign | -1.581 | Destabilizing | 0.963 | D | 0.659 | neutral | None | None | None | None | N |
E/V | 0.2649 | likely_benign | 0.2333 | benign | -0.303 | Destabilizing | 0.947 | D | 0.681 | prob.neutral | N | 0.491443682 | None | None | N |
E/W | 0.956 | likely_pathogenic | 0.9375 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Y | 0.7654 | likely_pathogenic | 0.7121 | pathogenic | -0.273 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.