Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8666 | 26221;26222;26223 | chr2:178715190;178715189;178715188 | chr2:179579917;179579916;179579915 |
N2AB | 8349 | 25270;25271;25272 | chr2:178715190;178715189;178715188 | chr2:179579917;179579916;179579915 |
N2A | 7422 | 22489;22490;22491 | chr2:178715190;178715189;178715188 | chr2:179579917;179579916;179579915 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.998 | D | 0.765 | 0.299 | 0.515603885326 | gnomAD-4.0.0 | 2.73703E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79908E-06 | 2.31906E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8723 | likely_pathogenic | 0.855 | pathogenic | -2.509 | Highly Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/C | 0.8704 | likely_pathogenic | 0.8619 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/D | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -2.786 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.9853 | likely_pathogenic | 0.9791 | pathogenic | -2.499 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/F | 0.4544 | ambiguous | 0.4123 | ambiguous | -1.425 | Destabilizing | 0.998 | D | 0.765 | deleterious | D | 0.534616982 | None | None | N |
L/G | 0.9719 | likely_pathogenic | 0.9655 | pathogenic | -3.094 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/H | 0.9601 | likely_pathogenic | 0.9461 | pathogenic | -2.66 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.494139481 | None | None | N |
L/I | 0.1058 | likely_benign | 0.1025 | benign | -0.777 | Destabilizing | 0.142 | N | 0.33 | neutral | N | 0.446165704 | None | None | N |
L/K | 0.9753 | likely_pathogenic | 0.9651 | pathogenic | -1.667 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
L/M | 0.2315 | likely_benign | 0.2248 | benign | -0.761 | Destabilizing | 0.932 | D | 0.548 | neutral | None | None | None | None | N |
L/N | 0.9789 | likely_pathogenic | 0.973 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/P | 0.9798 | likely_pathogenic | 0.9748 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.486287104 | None | None | N |
L/Q | 0.9417 | likely_pathogenic | 0.9236 | pathogenic | -1.905 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
L/R | 0.954 | likely_pathogenic | 0.9369 | pathogenic | -1.639 | Destabilizing | 0.999 | D | 0.783 | deleterious | N | 0.500722846 | None | None | N |
L/S | 0.9651 | likely_pathogenic | 0.9565 | pathogenic | -2.831 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/T | 0.8741 | likely_pathogenic | 0.8499 | pathogenic | -2.391 | Highly Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
L/V | 0.1567 | likely_benign | 0.1494 | benign | -1.341 | Destabilizing | 0.179 | N | 0.336 | neutral | N | 0.386706395 | None | None | N |
L/W | 0.8685 | likely_pathogenic | 0.8353 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/Y | 0.8792 | likely_pathogenic | 0.8492 | pathogenic | -1.56 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.