Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8669 | 26230;26231;26232 | chr2:178715181;178715180;178715179 | chr2:179579908;179579907;179579906 |
N2AB | 8352 | 25279;25280;25281 | chr2:178715181;178715180;178715179 | chr2:179579908;179579907;179579906 |
N2A | 7425 | 22498;22499;22500 | chr2:178715181;178715180;178715179 | chr2:179579908;179579907;179579906 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs773386252 | 0.103 | 0.998 | N | 0.667 | 0.403 | 0.579560680208 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65618E-04 |
T/S | rs773386252 | -0.288 | 0.157 | N | 0.295 | 0.084 | 0.202949470691 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
T/S | rs773386252 | -0.288 | 0.157 | N | 0.295 | 0.084 | 0.202949470691 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3216 | likely_benign | 0.2564 | benign | -0.4 | Destabilizing | 0.497 | N | 0.549 | neutral | N | 0.508507816 | None | None | I |
T/C | 0.8529 | likely_pathogenic | 0.8223 | pathogenic | -0.521 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
T/D | 0.7324 | likely_pathogenic | 0.6293 | pathogenic | 0.185 | Stabilizing | 0.986 | D | 0.605 | neutral | None | None | None | None | I |
T/E | 0.6877 | likely_pathogenic | 0.5792 | pathogenic | 0.16 | Stabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | I |
T/F | 0.5657 | likely_pathogenic | 0.4595 | ambiguous | -0.847 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/G | 0.6542 | likely_pathogenic | 0.5838 | pathogenic | -0.555 | Destabilizing | 0.994 | D | 0.648 | neutral | None | None | None | None | I |
T/H | 0.5453 | ambiguous | 0.4614 | ambiguous | -0.573 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/I | 0.6004 | likely_pathogenic | 0.4865 | ambiguous | -0.101 | Destabilizing | 0.998 | D | 0.667 | neutral | N | 0.506931736 | None | None | I |
T/K | 0.602 | likely_pathogenic | 0.4949 | ambiguous | -0.295 | Destabilizing | 0.997 | D | 0.61 | neutral | None | None | None | None | I |
T/L | 0.3091 | likely_benign | 0.2572 | benign | -0.101 | Destabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | I |
T/M | 0.1817 | likely_benign | 0.1647 | benign | -0.34 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
T/N | 0.276 | likely_benign | 0.2352 | benign | -0.295 | Destabilizing | 0.981 | D | 0.625 | neutral | N | 0.481571931 | None | None | I |
T/P | 0.6838 | likely_pathogenic | 0.5505 | ambiguous | -0.172 | Destabilizing | 0.991 | D | 0.667 | neutral | N | 0.496456885 | None | None | I |
T/Q | 0.5451 | ambiguous | 0.458 | ambiguous | -0.387 | Destabilizing | 0.997 | D | 0.661 | neutral | None | None | None | None | I |
T/R | 0.5549 | ambiguous | 0.4562 | ambiguous | -0.012 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
T/S | 0.169 | likely_benign | 0.155 | benign | -0.514 | Destabilizing | 0.157 | N | 0.295 | neutral | N | 0.452038458 | None | None | I |
T/V | 0.5063 | ambiguous | 0.4003 | ambiguous | -0.172 | Destabilizing | 0.992 | D | 0.646 | neutral | None | None | None | None | I |
T/W | 0.8494 | likely_pathogenic | 0.7855 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
T/Y | 0.5883 | likely_pathogenic | 0.4868 | ambiguous | -0.589 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.