Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8671 | 26236;26237;26238 | chr2:178715175;178715174;178715173 | chr2:179579902;179579901;179579900 |
N2AB | 8354 | 25285;25286;25287 | chr2:178715175;178715174;178715173 | chr2:179579902;179579901;179579900 |
N2A | 7427 | 22504;22505;22506 | chr2:178715175;178715174;178715173 | chr2:179579902;179579901;179579900 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs373927854 | -0.207 | 0.998 | D | 0.662 | 0.436 | 0.349870743963 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
P/L | rs2077292301 | None | 1.0 | N | 0.685 | 0.491 | 0.746293652351 | gnomAD-4.0.0 | 1.59142E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
P/S | None | None | 1.0 | N | 0.679 | 0.473 | 0.362960570912 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2806 | likely_benign | 0.2221 | benign | -0.661 | Destabilizing | 0.998 | D | 0.662 | neutral | D | 0.534654268 | None | None | I |
P/C | 0.8987 | likely_pathogenic | 0.8654 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/D | 0.7919 | likely_pathogenic | 0.7265 | pathogenic | -0.753 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | I |
P/E | 0.7168 | likely_pathogenic | 0.6273 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
P/F | 0.8958 | likely_pathogenic | 0.8483 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
P/G | 0.7261 | likely_pathogenic | 0.6467 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/H | 0.6251 | likely_pathogenic | 0.5426 | ambiguous | -0.498 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
P/I | 0.7187 | likely_pathogenic | 0.6675 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
P/K | 0.7834 | likely_pathogenic | 0.6956 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/L | 0.421 | ambiguous | 0.3554 | ambiguous | -0.33 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.494264385 | None | None | I |
P/M | 0.7509 | likely_pathogenic | 0.7002 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
P/N | 0.7306 | likely_pathogenic | 0.6726 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/Q | 0.5757 | likely_pathogenic | 0.4884 | ambiguous | -0.407 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.482841946 | None | None | I |
P/R | 0.6104 | likely_pathogenic | 0.5006 | ambiguous | -0.083 | Destabilizing | 1.0 | D | 0.673 | neutral | D | 0.535886419 | None | None | I |
P/S | 0.4377 | ambiguous | 0.3571 | ambiguous | -0.447 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.489718481 | None | None | I |
P/T | 0.3841 | ambiguous | 0.3273 | benign | -0.441 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.517703303 | None | None | I |
P/V | 0.5584 | ambiguous | 0.4902 | ambiguous | -0.407 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
P/W | 0.9603 | likely_pathogenic | 0.9394 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
P/Y | 0.8587 | likely_pathogenic | 0.8022 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.