Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8675 | 26248;26249;26250 | chr2:178715163;178715162;178715161 | chr2:179579890;179579889;179579888 |
N2AB | 8358 | 25297;25298;25299 | chr2:178715163;178715162;178715161 | chr2:179579890;179579889;179579888 |
N2A | 7431 | 22516;22517;22518 | chr2:178715163;178715162;178715161 | chr2:179579890;179579889;179579888 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs868429008 | -0.461 | 0.963 | D | 0.583 | 0.559 | 0.712839202888 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/F | rs868429008 | -0.461 | 0.963 | D | 0.583 | 0.559 | 0.712839202888 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/F | rs868429008 | -0.461 | 0.963 | D | 0.583 | 0.559 | 0.712839202888 | gnomAD-4.0.0 | 2.56254E-06 | None | None | None | None | N | None | 3.38432E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.071 | likely_benign | 0.0754 | benign | -0.582 | Destabilizing | 0.001 | N | 0.199 | neutral | D | 0.527789797 | None | None | N |
S/C | 0.1267 | likely_benign | 0.1393 | benign | -0.304 | Destabilizing | 0.977 | D | 0.573 | neutral | D | 0.531556667 | None | None | N |
S/D | 0.4819 | ambiguous | 0.5216 | ambiguous | -0.47 | Destabilizing | 0.841 | D | 0.529 | neutral | None | None | None | None | N |
S/E | 0.5422 | ambiguous | 0.5672 | pathogenic | -0.389 | Destabilizing | 0.881 | D | 0.529 | neutral | None | None | None | None | N |
S/F | 0.1351 | likely_benign | 0.1412 | benign | -0.48 | Destabilizing | 0.963 | D | 0.583 | neutral | D | 0.523424128 | None | None | N |
S/G | 0.1213 | likely_benign | 0.1263 | benign | -0.915 | Destabilizing | 0.666 | D | 0.505 | neutral | None | None | None | None | N |
S/H | 0.2806 | likely_benign | 0.2917 | benign | -1.308 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
S/I | 0.1027 | likely_benign | 0.1074 | benign | 0.22 | Stabilizing | 0.03 | N | 0.451 | neutral | None | None | None | None | N |
S/K | 0.584 | likely_pathogenic | 0.5983 | pathogenic | -0.552 | Destabilizing | 0.907 | D | 0.523 | neutral | None | None | None | None | N |
S/L | 0.0703 | likely_benign | 0.0763 | benign | 0.22 | Stabilizing | 0.668 | D | 0.523 | neutral | None | None | None | None | N |
S/M | 0.1399 | likely_benign | 0.1521 | benign | 0.263 | Stabilizing | 0.972 | D | 0.579 | neutral | None | None | None | None | N |
S/N | 0.1334 | likely_benign | 0.1449 | benign | -0.748 | Destabilizing | 0.383 | N | 0.547 | neutral | None | None | None | None | N |
S/P | 0.8942 | likely_pathogenic | 0.8835 | pathogenic | -0.011 | Destabilizing | 0.933 | D | 0.581 | neutral | D | 0.531049688 | None | None | N |
S/Q | 0.421 | ambiguous | 0.441 | ambiguous | -0.69 | Destabilizing | 0.995 | D | 0.577 | neutral | None | None | None | None | N |
S/R | 0.5073 | ambiguous | 0.5093 | ambiguous | -0.633 | Destabilizing | 0.986 | D | 0.581 | neutral | None | None | None | None | N |
S/T | 0.0651 | likely_benign | 0.0684 | benign | -0.615 | Destabilizing | 0.001 | N | 0.24 | neutral | N | 0.41325357 | None | None | N |
S/V | 0.1083 | likely_benign | 0.1149 | benign | -0.011 | Destabilizing | 0.047 | N | 0.403 | neutral | None | None | None | None | N |
S/W | 0.3142 | likely_benign | 0.3099 | benign | -0.619 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
S/Y | 0.1587 | likely_benign | 0.1627 | benign | -0.274 | Destabilizing | 0.981 | D | 0.582 | neutral | D | 0.532043611 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.