Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8677 | 26254;26255;26256 | chr2:178715157;178715156;178715155 | chr2:179579884;179579883;179579882 |
N2AB | 8360 | 25303;25304;25305 | chr2:178715157;178715156;178715155 | chr2:179579884;179579883;179579882 |
N2A | 7433 | 22522;22523;22524 | chr2:178715157;178715156;178715155 | chr2:179579884;179579883;179579882 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs778578388 | -1.006 | 0.56 | N | 0.523 | 0.226 | 0.426318900417 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
Y/C | rs778578388 | -1.006 | 0.56 | N | 0.523 | 0.226 | 0.426318900417 | gnomAD-4.0.0 | 4.51598E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93684E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.33 | likely_benign | 0.4407 | ambiguous | -2.52 | Highly Destabilizing | 0.007 | N | 0.347 | neutral | None | None | None | None | N |
Y/C | 0.1089 | likely_benign | 0.1207 | benign | -0.958 | Destabilizing | 0.56 | D | 0.523 | neutral | N | 0.468457679 | None | None | N |
Y/D | 0.327 | likely_benign | 0.431 | ambiguous | -0.986 | Destabilizing | 0.055 | N | 0.517 | neutral | N | 0.479560495 | None | None | N |
Y/E | 0.3049 | likely_benign | 0.4571 | ambiguous | -0.893 | Destabilizing | 0.016 | N | 0.415 | neutral | None | None | None | None | N |
Y/F | 0.083 | likely_benign | 0.0733 | benign | -1.054 | Destabilizing | None | N | 0.125 | neutral | N | 0.390964917 | None | None | N |
Y/G | 0.3465 | ambiguous | 0.4532 | ambiguous | -2.84 | Highly Destabilizing | 0.031 | N | 0.429 | neutral | None | None | None | None | N |
Y/H | 0.0722 | likely_benign | 0.09 | benign | -1.111 | Destabilizing | None | N | 0.139 | neutral | N | 0.486552811 | None | None | N |
Y/I | 0.23 | likely_benign | 0.2708 | benign | -1.537 | Destabilizing | 0.038 | N | 0.514 | neutral | None | None | None | None | N |
Y/K | 0.2431 | likely_benign | 0.3785 | ambiguous | -1.096 | Destabilizing | 0.016 | N | 0.417 | neutral | None | None | None | None | N |
Y/L | 0.1782 | likely_benign | 0.2548 | benign | -1.537 | Destabilizing | 0.016 | N | 0.411 | neutral | None | None | None | None | N |
Y/M | 0.2899 | likely_benign | 0.3573 | ambiguous | -1.145 | Destabilizing | 0.356 | N | 0.509 | neutral | None | None | None | None | N |
Y/N | 0.1162 | likely_benign | 0.1505 | benign | -1.311 | Destabilizing | 0.012 | N | 0.457 | neutral | N | 0.454872874 | None | None | N |
Y/P | 0.9541 | likely_pathogenic | 0.9763 | pathogenic | -1.862 | Destabilizing | 0.136 | N | 0.58 | neutral | None | None | None | None | N |
Y/Q | 0.1227 | likely_benign | 0.2055 | benign | -1.303 | Destabilizing | 0.001 | N | 0.204 | neutral | None | None | None | None | N |
Y/R | 0.1624 | likely_benign | 0.2609 | benign | -0.585 | Destabilizing | 0.001 | N | 0.267 | neutral | None | None | None | None | N |
Y/S | 0.1526 | likely_benign | 0.2033 | benign | -1.927 | Destabilizing | 0.001 | N | 0.255 | neutral | N | 0.456499262 | None | None | N |
Y/T | 0.217 | likely_benign | 0.3044 | benign | -1.746 | Destabilizing | 0.016 | N | 0.429 | neutral | None | None | None | None | N |
Y/V | 0.1968 | likely_benign | 0.229 | benign | -1.862 | Destabilizing | 0.031 | N | 0.422 | neutral | None | None | None | None | N |
Y/W | 0.2825 | likely_benign | 0.3243 | benign | -0.508 | Destabilizing | 0.628 | D | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.