Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8678 | 26257;26258;26259 | chr2:178715154;178715153;178715152 | chr2:179579881;179579880;179579879 |
N2AB | 8361 | 25306;25307;25308 | chr2:178715154;178715153;178715152 | chr2:179579881;179579880;179579879 |
N2A | 7434 | 22525;22526;22527 | chr2:178715154;178715153;178715152 | chr2:179579881;179579880;179579879 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2077288683 | None | 1.0 | D | 0.525 | 0.544 | 0.489036454283 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2077288683 | None | 1.0 | D | 0.525 | 0.544 | 0.489036454283 | gnomAD-4.0.0 | 2.5623E-06 | None | None | None | None | N | None | 1.69113E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39339E-06 | 0 | 0 |
K/T | rs1208054129 | None | 1.0 | N | 0.782 | 0.63 | 0.4897983601 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs1208054129 | None | 1.0 | N | 0.782 | 0.63 | 0.4897983601 | gnomAD-4.0.0 | 5.12478E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57355E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9698 | likely_pathogenic | 0.9778 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/C | 0.964 | likely_pathogenic | 0.9731 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
K/D | 0.9948 | likely_pathogenic | 0.9962 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/E | 0.9302 | likely_pathogenic | 0.9495 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.525 | neutral | D | 0.541300135 | None | None | N |
K/F | 0.9802 | likely_pathogenic | 0.987 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
K/G | 0.9799 | likely_pathogenic | 0.986 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/H | 0.7569 | likely_pathogenic | 0.7888 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
K/I | 0.8983 | likely_pathogenic | 0.9273 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.887 | deleterious | N | 0.503824177 | None | None | N |
K/L | 0.8676 | likely_pathogenic | 0.9004 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
K/M | 0.8127 | likely_pathogenic | 0.8588 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/N | 0.9772 | likely_pathogenic | 0.9847 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.52969034 | None | None | N |
K/P | 0.9971 | likely_pathogenic | 0.998 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
K/Q | 0.6464 | likely_pathogenic | 0.7014 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | N | 0.50844576 | None | None | N |
K/R | 0.1076 | likely_benign | 0.111 | benign | -0.936 | Destabilizing | 0.999 | D | 0.56 | neutral | N | 0.516761074 | None | None | N |
K/S | 0.9815 | likely_pathogenic | 0.9861 | pathogenic | -1.718 | Destabilizing | 1.0 | D | 0.519 | neutral | None | None | None | None | N |
K/T | 0.9431 | likely_pathogenic | 0.9571 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.517915961 | None | None | N |
K/V | 0.8776 | likely_pathogenic | 0.907 | pathogenic | -0.193 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
K/W | 0.9645 | likely_pathogenic | 0.9726 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
K/Y | 0.9463 | likely_pathogenic | 0.9576 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.