Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8682 | 26269;26270;26271 | chr2:178715142;178715141;178715140 | chr2:179579869;179579868;179579867 |
N2AB | 8365 | 25318;25319;25320 | chr2:178715142;178715141;178715140 | chr2:179579869;179579868;179579867 |
N2A | 7438 | 22537;22538;22539 | chr2:178715142;178715141;178715140 | chr2:179579869;179579868;179579867 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.031 | N | 0.111 | 0.068 | 0.221734844693 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1662 | likely_benign | 0.1681 | benign | -0.665 | Destabilizing | 0.427 | N | 0.272 | neutral | N | 0.474261957 | None | None | N |
E/C | 0.8939 | likely_pathogenic | 0.889 | pathogenic | -0.441 | Destabilizing | 0.995 | D | 0.466 | neutral | None | None | None | None | N |
E/D | 0.2718 | likely_benign | 0.2936 | benign | -0.569 | Destabilizing | 0.088 | N | 0.287 | neutral | N | 0.498176179 | None | None | N |
E/F | 0.8085 | likely_pathogenic | 0.8102 | pathogenic | -0.069 | Destabilizing | 0.969 | D | 0.427 | neutral | None | None | None | None | N |
E/G | 0.2858 | likely_benign | 0.296 | benign | -0.948 | Destabilizing | 0.857 | D | 0.323 | neutral | N | 0.494508329 | None | None | N |
E/H | 0.6381 | likely_pathogenic | 0.6536 | pathogenic | 0.176 | Stabilizing | 0.022 | N | 0.159 | neutral | None | None | None | None | N |
E/I | 0.3106 | likely_benign | 0.3055 | benign | 0.082 | Stabilizing | 0.937 | D | 0.44 | neutral | None | None | None | None | N |
E/K | 0.2512 | likely_benign | 0.2744 | benign | -0.041 | Destabilizing | 0.409 | N | 0.251 | neutral | N | 0.511740122 | None | None | N |
E/L | 0.3392 | likely_benign | 0.3412 | ambiguous | 0.082 | Stabilizing | 0.675 | D | 0.38 | neutral | None | None | None | None | N |
E/M | 0.4175 | ambiguous | 0.4122 | ambiguous | 0.148 | Stabilizing | 0.909 | D | 0.405 | neutral | None | None | None | None | N |
E/N | 0.4363 | ambiguous | 0.4563 | ambiguous | -0.659 | Destabilizing | 0.491 | N | 0.287 | neutral | None | None | None | None | N |
E/P | 0.3333 | likely_benign | 0.3333 | benign | -0.147 | Destabilizing | None | N | 0.166 | neutral | None | None | None | None | N |
E/Q | 0.1476 | likely_benign | 0.1495 | benign | -0.557 | Destabilizing | 0.031 | N | 0.111 | neutral | N | 0.448768866 | None | None | N |
E/R | 0.4244 | ambiguous | 0.4487 | ambiguous | 0.377 | Stabilizing | 0.689 | D | 0.289 | neutral | None | None | None | None | N |
E/S | 0.3241 | likely_benign | 0.3402 | ambiguous | -0.847 | Destabilizing | 0.705 | D | 0.21 | neutral | None | None | None | None | N |
E/T | 0.3208 | likely_benign | 0.3302 | benign | -0.603 | Destabilizing | 0.768 | D | 0.281 | neutral | None | None | None | None | N |
E/V | 0.1928 | likely_benign | 0.1901 | benign | -0.147 | Destabilizing | 0.527 | D | 0.351 | neutral | N | 0.509433323 | None | None | N |
E/W | 0.9488 | likely_pathogenic | 0.95 | pathogenic | 0.244 | Stabilizing | 0.999 | D | 0.49 | neutral | None | None | None | None | N |
E/Y | 0.7359 | likely_pathogenic | 0.7409 | pathogenic | 0.207 | Stabilizing | 0.977 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.