Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8684 | 26275;26276;26277 | chr2:178715136;178715135;178715134 | chr2:179579863;179579862;179579861 |
N2AB | 8367 | 25324;25325;25326 | chr2:178715136;178715135;178715134 | chr2:179579863;179579862;179579861 |
N2A | 7440 | 22543;22544;22545 | chr2:178715136;178715135;178715134 | chr2:179579863;179579862;179579861 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/M | rs1185236077 | -0.194 | 0.054 | N | 0.199 | 0.187 | 0.304435445954 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
R/M | rs1185236077 | -0.194 | 0.054 | N | 0.199 | 0.187 | 0.304435445954 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79904E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5462 | ambiguous | 0.5713 | pathogenic | 0.051 | Stabilizing | 0.154 | N | 0.24 | neutral | None | None | None | None | N |
R/C | 0.2443 | likely_benign | 0.2734 | benign | -0.311 | Destabilizing | 0.994 | D | 0.271 | neutral | None | None | None | None | N |
R/D | 0.8321 | likely_pathogenic | 0.852 | pathogenic | -0.321 | Destabilizing | 0.669 | D | 0.388 | neutral | None | None | None | None | N |
R/E | 0.5951 | likely_pathogenic | 0.6068 | pathogenic | -0.279 | Destabilizing | 0.111 | N | 0.265 | neutral | None | None | None | None | N |
R/F | 0.5855 | likely_pathogenic | 0.5994 | pathogenic | -0.286 | Destabilizing | 0.738 | D | 0.32 | neutral | None | None | None | None | N |
R/G | 0.3826 | ambiguous | 0.413 | ambiguous | -0.083 | Destabilizing | 0.386 | N | 0.327 | neutral | N | 0.515012501 | None | None | N |
R/H | 0.1155 | likely_benign | 0.1257 | benign | -0.571 | Destabilizing | 0.948 | D | 0.336 | neutral | None | None | None | None | N |
R/I | 0.3329 | likely_benign | 0.3648 | ambiguous | 0.356 | Stabilizing | 0.296 | N | 0.363 | neutral | None | None | None | None | N |
R/K | 0.1015 | likely_benign | 0.1074 | benign | -0.195 | Destabilizing | None | N | 0.142 | neutral | N | 0.460329867 | None | None | N |
R/L | 0.2992 | likely_benign | 0.3344 | benign | 0.356 | Stabilizing | 0.148 | N | 0.278 | neutral | None | None | None | None | N |
R/M | 0.378 | ambiguous | 0.4099 | ambiguous | -0.116 | Destabilizing | 0.054 | N | 0.199 | neutral | N | 0.489722162 | None | None | N |
R/N | 0.7026 | likely_pathogenic | 0.7336 | pathogenic | -0.165 | Destabilizing | 0.669 | D | 0.289 | neutral | None | None | None | None | N |
R/P | 0.5931 | likely_pathogenic | 0.6024 | pathogenic | 0.272 | Stabilizing | 0.804 | D | 0.375 | neutral | None | None | None | None | N |
R/Q | 0.1327 | likely_benign | 0.1437 | benign | -0.175 | Destabilizing | 0.599 | D | 0.309 | neutral | None | None | None | None | N |
R/S | 0.641 | likely_pathogenic | 0.6648 | pathogenic | -0.318 | Destabilizing | 0.056 | N | 0.179 | neutral | N | 0.472605731 | None | None | N |
R/T | 0.3888 | ambiguous | 0.4237 | ambiguous | -0.172 | Destabilizing | 0.02 | N | 0.163 | neutral | N | 0.503832715 | None | None | N |
R/V | 0.4212 | ambiguous | 0.45 | ambiguous | 0.272 | Stabilizing | 0.008 | N | 0.23 | neutral | None | None | None | None | N |
R/W | 0.1815 | likely_benign | 0.1938 | benign | -0.492 | Destabilizing | 0.995 | D | 0.279 | neutral | N | 0.509890332 | None | None | N |
R/Y | 0.4368 | ambiguous | 0.4628 | ambiguous | -0.081 | Destabilizing | 0.946 | D | 0.323 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.