Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8693 | 26302;26303;26304 | chr2:178715109;178715108;178715107 | chr2:179579836;179579835;179579834 |
N2AB | 8376 | 25351;25352;25353 | chr2:178715109;178715108;178715107 | chr2:179579836;179579835;179579834 |
N2A | 7449 | 22570;22571;22572 | chr2:178715109;178715108;178715107 | chr2:179579836;179579835;179579834 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.944 | D | 0.692 | 0.36 | 0.265929055128 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0778 | likely_benign | 0.0727 | benign | -0.326 | Destabilizing | 0.035 | N | 0.51 | neutral | N | 0.483855904 | None | None | N |
S/C | 0.1784 | likely_benign | 0.1679 | benign | -0.179 | Destabilizing | 0.995 | D | 0.665 | neutral | N | 0.5206243 | None | None | N |
S/D | 0.545 | ambiguous | 0.5227 | ambiguous | 0.06 | Stabilizing | 0.76 | D | 0.606 | neutral | None | None | None | None | N |
S/E | 0.5688 | likely_pathogenic | 0.5516 | ambiguous | -0.034 | Destabilizing | 0.816 | D | 0.602 | neutral | None | None | None | None | N |
S/F | 0.3025 | likely_benign | 0.2714 | benign | -0.898 | Destabilizing | 0.061 | N | 0.483 | neutral | D | 0.522418476 | None | None | N |
S/G | 0.1345 | likely_benign | 0.1236 | benign | -0.446 | Destabilizing | 0.018 | N | 0.285 | neutral | None | None | None | None | N |
S/H | 0.4239 | ambiguous | 0.4216 | ambiguous | -1.041 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
S/I | 0.2626 | likely_benign | 0.2226 | benign | -0.14 | Destabilizing | 0.977 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/K | 0.7071 | likely_pathogenic | 0.7 | pathogenic | -0.453 | Destabilizing | 0.922 | D | 0.602 | neutral | None | None | None | None | N |
S/L | 0.1242 | likely_benign | 0.1117 | benign | -0.14 | Destabilizing | 0.856 | D | 0.666 | neutral | None | None | None | None | N |
S/M | 0.2193 | likely_benign | 0.211 | benign | 0.167 | Stabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
S/N | 0.1931 | likely_benign | 0.1837 | benign | -0.136 | Destabilizing | 0.271 | N | 0.623 | neutral | None | None | None | None | N |
S/P | 0.5495 | ambiguous | 0.494 | ambiguous | -0.173 | Destabilizing | 0.944 | D | 0.692 | prob.neutral | D | 0.526882933 | None | None | N |
S/Q | 0.534 | ambiguous | 0.5285 | ambiguous | -0.417 | Destabilizing | 0.988 | D | 0.647 | neutral | None | None | None | None | N |
S/R | 0.6437 | likely_pathogenic | 0.626 | pathogenic | -0.271 | Destabilizing | 0.988 | D | 0.692 | prob.neutral | None | None | None | None | N |
S/T | 0.083 | likely_benign | 0.0823 | benign | -0.23 | Destabilizing | 0.004 | N | 0.341 | neutral | N | 0.516319223 | None | None | N |
S/V | 0.2186 | likely_benign | 0.1886 | benign | -0.173 | Destabilizing | 0.689 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/W | 0.4117 | ambiguous | 0.3885 | ambiguous | -0.903 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/Y | 0.2408 | likely_benign | 0.227 | benign | -0.62 | Destabilizing | 0.94 | D | 0.751 | deleterious | D | 0.532134037 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.