Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8694 | 26305;26306;26307 | chr2:178715106;178715105;178715104 | chr2:179579833;179579832;179579831 |
N2AB | 8377 | 25354;25355;25356 | chr2:178715106;178715105;178715104 | chr2:179579833;179579832;179579831 |
N2A | 7450 | 22573;22574;22575 | chr2:178715106;178715105;178715104 | chr2:179579833;179579832;179579831 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs373247663 | 0.382 | 0.135 | N | 0.207 | 0.149 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2727 | likely_benign | 0.2015 | benign | 0.005 | Stabilizing | 0.396 | N | 0.527 | neutral | N | 0.5148205 | None | None | N |
E/C | 0.9395 | likely_pathogenic | 0.8865 | pathogenic | 0.045 | Stabilizing | 0.993 | D | 0.656 | neutral | None | None | None | None | N |
E/D | 0.1482 | likely_benign | 0.1282 | benign | -0.136 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.462506168 | None | None | N |
E/F | 0.8975 | likely_pathogenic | 0.8188 | pathogenic | -0.075 | Destabilizing | 0.986 | D | 0.598 | neutral | None | None | None | None | N |
E/G | 0.2246 | likely_benign | 0.1573 | benign | -0.116 | Destabilizing | 0.813 | D | 0.497 | neutral | N | 0.507875885 | None | None | N |
E/H | 0.5689 | likely_pathogenic | 0.4583 | ambiguous | 0.373 | Stabilizing | 0.942 | D | 0.52 | neutral | None | None | None | None | N |
E/I | 0.6182 | likely_pathogenic | 0.4907 | ambiguous | 0.264 | Stabilizing | 0.915 | D | 0.6 | neutral | None | None | None | None | N |
E/K | 0.1528 | likely_benign | 0.1205 | benign | 0.535 | Stabilizing | 0.008 | N | 0.242 | neutral | N | 0.457233634 | None | None | N |
E/L | 0.658 | likely_pathogenic | 0.5367 | ambiguous | 0.264 | Stabilizing | 0.841 | D | 0.531 | neutral | None | None | None | None | N |
E/M | 0.6726 | likely_pathogenic | 0.5654 | pathogenic | 0.156 | Stabilizing | 0.957 | D | 0.598 | neutral | None | None | None | None | N |
E/N | 0.3254 | likely_benign | 0.2566 | benign | 0.377 | Stabilizing | 0.259 | N | 0.473 | neutral | None | None | None | None | N |
E/P | 0.8867 | likely_pathogenic | 0.7599 | pathogenic | 0.196 | Stabilizing | 0.614 | D | 0.55 | neutral | None | None | None | None | N |
E/Q | 0.1614 | likely_benign | 0.1329 | benign | 0.389 | Stabilizing | 0.135 | N | 0.207 | neutral | N | 0.509163964 | None | None | N |
E/R | 0.2934 | likely_benign | 0.219 | benign | 0.67 | Stabilizing | 0.617 | D | 0.473 | neutral | None | None | None | None | N |
E/S | 0.2795 | likely_benign | 0.2171 | benign | 0.218 | Stabilizing | 0.634 | D | 0.497 | neutral | None | None | None | None | N |
E/T | 0.3474 | ambiguous | 0.2653 | benign | 0.322 | Stabilizing | 0.894 | D | 0.501 | neutral | None | None | None | None | N |
E/V | 0.3954 | ambiguous | 0.3007 | benign | 0.196 | Stabilizing | 0.739 | D | 0.518 | neutral | N | 0.48643048 | None | None | N |
E/W | 0.9466 | likely_pathogenic | 0.8931 | pathogenic | -0.042 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/Y | 0.7905 | likely_pathogenic | 0.6701 | pathogenic | 0.148 | Stabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.