Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8695 | 26308;26309;26310 | chr2:178715103;178715102;178715101 | chr2:179579830;179579829;179579828 |
N2AB | 8378 | 25357;25358;25359 | chr2:178715103;178715102;178715101 | chr2:179579830;179579829;179579828 |
N2A | 7451 | 22576;22577;22578 | chr2:178715103;178715102;178715101 | chr2:179579830;179579829;179579828 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs767736451 | 0.227 | 0.126 | N | 0.223 | 0.116 | 0.115124310173 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
N/D | rs767736451 | 0.227 | 0.126 | N | 0.223 | 0.116 | 0.115124310173 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
N/D | rs767736451 | 0.227 | 0.126 | N | 0.223 | 0.116 | 0.115124310173 | gnomAD-4.0.0 | 9.91551E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39061E-06 | 1.31752E-04 | 0 |
N/K | None | None | 0.897 | N | 0.163 | 0.15 | 0.124217242631 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3222 | likely_benign | 0.2862 | benign | -0.217 | Destabilizing | 0.058 | N | 0.292 | neutral | None | None | None | None | N |
N/C | 0.529 | ambiguous | 0.4661 | ambiguous | -0.042 | Destabilizing | 0.996 | D | 0.391 | neutral | None | None | None | None | N |
N/D | 0.1312 | likely_benign | 0.131 | benign | 0.217 | Stabilizing | 0.126 | N | 0.223 | neutral | N | 0.452954738 | None | None | N |
N/E | 0.4358 | ambiguous | 0.4134 | ambiguous | 0.195 | Stabilizing | 0.04 | N | 0.121 | neutral | None | None | None | None | N |
N/F | 0.6603 | likely_pathogenic | 0.6045 | pathogenic | -0.831 | Destabilizing | 0.996 | D | 0.372 | neutral | None | None | None | None | N |
N/G | 0.3142 | likely_benign | 0.284 | benign | -0.334 | Destabilizing | 0.003 | N | 0.077 | neutral | None | None | None | None | N |
N/H | 0.1612 | likely_benign | 0.1391 | benign | -0.261 | Destabilizing | 0.986 | D | 0.358 | neutral | N | 0.514544701 | None | None | N |
N/I | 0.3447 | ambiguous | 0.3131 | benign | -0.003 | Destabilizing | 0.959 | D | 0.398 | neutral | N | 0.480481867 | None | None | N |
N/K | 0.3399 | likely_benign | 0.3032 | benign | 0.154 | Stabilizing | 0.897 | D | 0.163 | neutral | N | 0.513504551 | None | None | N |
N/L | 0.4063 | ambiguous | 0.3623 | ambiguous | -0.003 | Destabilizing | 0.897 | D | 0.321 | neutral | None | None | None | None | N |
N/M | 0.4364 | ambiguous | 0.3996 | ambiguous | -0.142 | Destabilizing | 0.997 | D | 0.353 | neutral | None | None | None | None | N |
N/P | 0.6993 | likely_pathogenic | 0.6279 | pathogenic | -0.051 | Destabilizing | 0.868 | D | 0.361 | neutral | None | None | None | None | N |
N/Q | 0.4006 | ambiguous | 0.3604 | ambiguous | -0.258 | Destabilizing | 0.938 | D | 0.297 | neutral | None | None | None | None | N |
N/R | 0.4381 | ambiguous | 0.381 | ambiguous | 0.23 | Stabilizing | 0.92 | D | 0.301 | neutral | None | None | None | None | N |
N/S | 0.1359 | likely_benign | 0.1268 | benign | -0.15 | Destabilizing | 0.027 | N | 0.098 | neutral | N | 0.508328018 | None | None | N |
N/T | 0.1969 | likely_benign | 0.1875 | benign | -0.037 | Destabilizing | 0.351 | N | 0.16 | neutral | N | 0.511235037 | None | None | N |
N/V | 0.3722 | ambiguous | 0.3412 | ambiguous | -0.051 | Destabilizing | 0.72 | D | 0.356 | neutral | None | None | None | None | N |
N/W | 0.8521 | likely_pathogenic | 0.813 | pathogenic | -0.958 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
N/Y | 0.2038 | likely_benign | 0.176 | benign | -0.607 | Destabilizing | 0.995 | D | 0.355 | neutral | N | 0.469125561 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.