Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8698 | 26317;26318;26319 | chr2:178715094;178715093;178715092 | chr2:179579821;179579820;179579819 |
N2AB | 8381 | 25366;25367;25368 | chr2:178715094;178715093;178715092 | chr2:179579821;179579820;179579819 |
N2A | 7454 | 22585;22586;22587 | chr2:178715094;178715093;178715092 | chr2:179579821;179579820;179579819 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs751582645 | -1.713 | None | N | 0.439 | 0.089 | 0.104622674875 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/S | rs751582645 | -1.713 | None | N | 0.439 | 0.089 | 0.104622674875 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0636 | likely_benign | 0.0611 | benign | -1.106 | Destabilizing | None | N | 0.361 | neutral | N | 0.388636688 | None | None | N |
T/C | 0.2908 | likely_benign | 0.2973 | benign | -0.712 | Destabilizing | 0.863 | D | 0.772 | deleterious | None | None | None | None | N |
T/D | 0.801 | likely_pathogenic | 0.7896 | pathogenic | -1.456 | Destabilizing | 0.047 | N | 0.789 | deleterious | None | None | None | None | N |
T/E | 0.7599 | likely_pathogenic | 0.7423 | pathogenic | -1.237 | Destabilizing | 0.836 | D | 0.793 | deleterious | None | None | None | None | N |
T/F | 0.4006 | ambiguous | 0.3896 | ambiguous | -0.709 | Destabilizing | 0.99 | D | 0.803 | deleterious | None | None | None | None | N |
T/G | 0.3351 | likely_benign | 0.3194 | benign | -1.548 | Destabilizing | 0.146 | N | 0.741 | deleterious | None | None | None | None | N |
T/H | 0.4252 | ambiguous | 0.4359 | ambiguous | -1.622 | Destabilizing | 0.667 | D | 0.772 | deleterious | None | None | None | None | N |
T/I | 0.2653 | likely_benign | 0.243 | benign | 0.064 | Stabilizing | 0.309 | N | 0.798 | deleterious | N | 0.464462598 | None | None | N |
T/K | 0.672 | likely_pathogenic | 0.644 | pathogenic | -0.378 | Destabilizing | 0.877 | D | 0.797 | deleterious | None | None | None | None | N |
T/L | 0.1651 | likely_benign | 0.1522 | benign | 0.064 | Stabilizing | 0.509 | D | 0.746 | deleterious | None | None | None | None | N |
T/M | 0.1283 | likely_benign | 0.1268 | benign | 0.087 | Stabilizing | 0.973 | D | 0.783 | deleterious | None | None | None | None | N |
T/N | 0.3024 | likely_benign | 0.3039 | benign | -1.162 | Destabilizing | 0.036 | N | 0.751 | deleterious | N | 0.477181179 | None | None | N |
T/P | 0.6608 | likely_pathogenic | 0.5851 | pathogenic | -0.294 | Destabilizing | 0.207 | N | 0.804 | deleterious | N | 0.483741792 | None | None | N |
T/Q | 0.5376 | ambiguous | 0.5382 | ambiguous | -0.888 | Destabilizing | 0.431 | N | 0.811 | deleterious | None | None | None | None | N |
T/R | 0.5499 | ambiguous | 0.5133 | ambiguous | -0.664 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
T/S | 0.127 | likely_benign | 0.1327 | benign | -1.401 | Destabilizing | None | N | 0.439 | neutral | N | 0.414244421 | None | None | N |
T/V | 0.1586 | likely_benign | 0.1458 | benign | -0.294 | Destabilizing | 0.011 | N | 0.451 | neutral | None | None | None | None | N |
T/W | 0.8135 | likely_pathogenic | 0.8174 | pathogenic | -0.88 | Destabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
T/Y | 0.4182 | ambiguous | 0.4285 | ambiguous | -0.492 | Destabilizing | 0.957 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.