Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8711 | 26356;26357;26358 | chr2:178715055;178715054;178715053 | chr2:179579782;179579781;179579780 |
N2AB | 8394 | 25405;25406;25407 | chr2:178715055;178715054;178715053 | chr2:179579782;179579781;179579780 |
N2A | 7467 | 22624;22625;22626 | chr2:178715055;178715054;178715053 | chr2:179579782;179579781;179579780 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1220276093 | -0.193 | 1.0 | D | 0.833 | 0.72 | 0.874928965229 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/R | rs1220276093 | -0.193 | 1.0 | D | 0.833 | 0.72 | 0.874928965229 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | N | None | 5.66251E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3954 | ambiguous | 0.5384 | ambiguous | -0.491 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.587470787 | None | None | N |
G/C | 0.7603 | likely_pathogenic | 0.863 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/D | 0.827 | likely_pathogenic | 0.8918 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/E | 0.8888 | likely_pathogenic | 0.9344 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.656230808 | None | None | N |
G/F | 0.9722 | likely_pathogenic | 0.9819 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
G/H | 0.9492 | likely_pathogenic | 0.9698 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/I | 0.9642 | likely_pathogenic | 0.9819 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
G/K | 0.9488 | likely_pathogenic | 0.9693 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
G/L | 0.9347 | likely_pathogenic | 0.9583 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
G/M | 0.9554 | likely_pathogenic | 0.9752 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
G/N | 0.8865 | likely_pathogenic | 0.9255 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/P | 0.9942 | likely_pathogenic | 0.9967 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/Q | 0.8919 | likely_pathogenic | 0.9325 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/R | 0.861 | likely_pathogenic | 0.9144 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.656029004 | None | None | N |
G/S | 0.3226 | likely_benign | 0.451 | ambiguous | -0.978 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/T | 0.7888 | likely_pathogenic | 0.8668 | pathogenic | -0.937 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
G/V | 0.9102 | likely_pathogenic | 0.9508 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.656230808 | None | None | N |
G/W | 0.9358 | likely_pathogenic | 0.9576 | pathogenic | -1.167 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.656432613 | None | None | N |
G/Y | 0.9623 | likely_pathogenic | 0.9776 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.