Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8712 | 26359;26360;26361 | chr2:178715052;178715051;178715050 | chr2:179579779;179579778;179579777 |
N2AB | 8395 | 25408;25409;25410 | chr2:178715052;178715051;178715050 | chr2:179579779;179579778;179579777 |
N2A | 7468 | 22627;22628;22629 | chr2:178715052;178715051;178715050 | chr2:179579779;179579778;179579777 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.534 | N | 0.57 | 0.218 | 0.271763555656 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1246 | likely_benign | 0.1562 | benign | -0.593 | Destabilizing | 0.382 | N | 0.636 | neutral | N | 0.485972726 | None | None | N |
E/C | 0.7363 | likely_pathogenic | 0.8155 | pathogenic | -0.171 | Destabilizing | 0.993 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/D | 0.0894 | likely_benign | 0.0934 | benign | -0.409 | Destabilizing | None | N | 0.323 | neutral | N | 0.485575028 | None | None | N |
E/F | 0.5305 | ambiguous | 0.6223 | pathogenic | -0.201 | Destabilizing | 0.985 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/G | 0.1552 | likely_benign | 0.2052 | benign | -0.832 | Destabilizing | 0.804 | D | 0.627 | neutral | N | 0.509218769 | None | None | N |
E/H | 0.3177 | likely_benign | 0.409 | ambiguous | -0.025 | Destabilizing | 0.939 | D | 0.626 | neutral | None | None | None | None | N |
E/I | 0.1902 | likely_benign | 0.2318 | benign | 0.023 | Stabilizing | 0.91 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/K | 0.1036 | likely_benign | 0.1521 | benign | 0.317 | Stabilizing | 0.534 | D | 0.57 | neutral | N | 0.494538441 | None | None | N |
E/L | 0.2421 | likely_benign | 0.3097 | benign | 0.023 | Stabilizing | 0.833 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/M | 0.2916 | likely_benign | 0.3597 | ambiguous | 0.176 | Stabilizing | 0.954 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/N | 0.1489 | likely_benign | 0.1841 | benign | -0.249 | Destabilizing | 0.248 | N | 0.557 | neutral | None | None | None | None | N |
E/P | 0.4885 | ambiguous | 0.5657 | pathogenic | -0.163 | Destabilizing | 0.6 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Q | 0.1083 | likely_benign | 0.1332 | benign | -0.168 | Destabilizing | 0.129 | N | 0.299 | neutral | N | 0.502024561 | None | None | N |
E/R | 0.1934 | likely_benign | 0.2841 | benign | 0.546 | Stabilizing | 0.914 | D | 0.607 | neutral | None | None | None | None | N |
E/S | 0.1454 | likely_benign | 0.179 | benign | -0.392 | Destabilizing | 0.06 | N | 0.318 | neutral | None | None | None | None | N |
E/T | 0.1499 | likely_benign | 0.1795 | benign | -0.177 | Destabilizing | 0.531 | D | 0.633 | neutral | None | None | None | None | N |
E/V | 0.1286 | likely_benign | 0.1529 | benign | -0.163 | Destabilizing | 0.844 | D | 0.699 | prob.neutral | N | 0.481804005 | None | None | N |
E/W | 0.7486 | likely_pathogenic | 0.8288 | pathogenic | 0.073 | Stabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Y | 0.3935 | ambiguous | 0.4894 | ambiguous | 0.078 | Stabilizing | 0.994 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.