Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8713 | 26362;26363;26364 | chr2:178715049;178715048;178715047 | chr2:179579776;179579775;179579774 |
N2AB | 8396 | 25411;25412;25413 | chr2:178715049;178715048;178715047 | chr2:179579776;179579775;179579774 |
N2A | 7469 | 22630;22631;22632 | chr2:178715049;178715048;178715047 | chr2:179579776;179579775;179579774 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1294600680 | -1.703 | 1.0 | D | 0.873 | 0.845 | 0.880723162625 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/C | rs1294600680 | -1.703 | 1.0 | D | 0.873 | 0.845 | 0.880723162625 | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
Y/D | None | None | 1.0 | D | 0.874 | 0.828 | 0.914177712444 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9966 | likely_pathogenic | 0.9981 | pathogenic | -2.161 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/C | 0.9633 | likely_pathogenic | 0.9814 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.659924006 | None | None | N |
Y/D | 0.9983 | likely_pathogenic | 0.9991 | pathogenic | -2.739 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.659924006 | None | None | N |
Y/E | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/F | 0.2118 | likely_benign | 0.2296 | benign | -0.711 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | D | 0.606627936 | None | None | N |
Y/G | 0.9932 | likely_pathogenic | 0.9961 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/H | 0.9835 | likely_pathogenic | 0.9902 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.643470676 | None | None | N |
Y/I | 0.8414 | likely_pathogenic | 0.8721 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/K | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/L | 0.845 | likely_pathogenic | 0.8617 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Y/M | 0.9598 | likely_pathogenic | 0.9704 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.9854 | likely_pathogenic | 0.9916 | pathogenic | -2.911 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.659924006 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.192 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/Q | 0.9987 | likely_pathogenic | 0.9993 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/R | 0.9969 | likely_pathogenic | 0.998 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9933 | likely_pathogenic | 0.9963 | pathogenic | -3.242 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.659924006 | None | None | N |
Y/T | 0.9952 | likely_pathogenic | 0.9972 | pathogenic | -2.847 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/V | 0.8615 | likely_pathogenic | 0.8886 | pathogenic | -1.192 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/W | 0.8553 | likely_pathogenic | 0.8863 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.