Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8720 | 26383;26384;26385 | chr2:178715028;178715027;178715026 | chr2:179579755;179579754;179579753 |
N2AB | 8403 | 25432;25433;25434 | chr2:178715028;178715027;178715026 | chr2:179579755;179579754;179579753 |
N2A | 7476 | 22651;22652;22653 | chr2:178715028;178715027;178715026 | chr2:179579755;179579754;179579753 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs980079508 | 0.565 | 0.008 | N | 0.269 | 0.198 | 0.288727942641 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
D/N | rs980079508 | 0.565 | 0.008 | N | 0.269 | 0.198 | 0.288727942641 | gnomAD-4.0.0 | 2.05364E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69958E-06 | 0 | 0 |
D/Y | rs980079508 | None | 0.991 | N | 0.342 | 0.344 | 0.53371040847 | gnomAD-4.0.0 | 2.73818E-06 | None | None | None | None | I | None | 8.97076E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99858E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1509 | likely_benign | 0.1728 | benign | 0.051 | Stabilizing | 0.227 | N | 0.371 | neutral | N | 0.473701809 | None | None | I |
D/C | 0.6493 | likely_pathogenic | 0.6869 | pathogenic | -0.058 | Destabilizing | 0.978 | D | 0.329 | neutral | None | None | None | None | I |
D/E | 0.1095 | likely_benign | 0.1116 | benign | -0.395 | Destabilizing | None | N | 0.19 | neutral | N | 0.419365892 | None | None | I |
D/F | 0.5595 | ambiguous | 0.6079 | pathogenic | -0.12 | Destabilizing | 0.98 | D | 0.343 | neutral | None | None | None | None | I |
D/G | 0.2078 | likely_benign | 0.2548 | benign | -0.041 | Destabilizing | 0.298 | N | 0.365 | neutral | N | 0.467391912 | None | None | I |
D/H | 0.2812 | likely_benign | 0.3259 | benign | 0.447 | Stabilizing | 0.931 | D | 0.343 | neutral | N | 0.519090169 | None | None | I |
D/I | 0.305 | likely_benign | 0.3293 | benign | 0.223 | Stabilizing | 0.772 | D | 0.363 | neutral | None | None | None | None | I |
D/K | 0.3605 | ambiguous | 0.4263 | ambiguous | 0.466 | Stabilizing | 0.772 | D | 0.375 | neutral | None | None | None | None | I |
D/L | 0.3503 | ambiguous | 0.393 | ambiguous | 0.223 | Stabilizing | 0.772 | D | 0.394 | neutral | None | None | None | None | I |
D/M | 0.5234 | ambiguous | 0.5598 | ambiguous | 0.068 | Stabilizing | 0.985 | D | 0.321 | neutral | None | None | None | None | I |
D/N | 0.1135 | likely_benign | 0.1238 | benign | 0.281 | Stabilizing | 0.008 | N | 0.269 | neutral | N | 0.462004735 | None | None | I |
D/P | 0.7046 | likely_pathogenic | 0.7504 | pathogenic | 0.184 | Stabilizing | 0.487 | N | 0.357 | neutral | None | None | None | None | I |
D/Q | 0.3061 | likely_benign | 0.3476 | ambiguous | 0.262 | Stabilizing | 0.559 | D | 0.287 | neutral | None | None | None | None | I |
D/R | 0.395 | ambiguous | 0.4659 | ambiguous | 0.634 | Stabilizing | 0.96 | D | 0.375 | neutral | None | None | None | None | I |
D/S | 0.1264 | likely_benign | 0.1416 | benign | 0.198 | Stabilizing | 0.03 | N | 0.157 | neutral | None | None | None | None | I |
D/T | 0.2176 | likely_benign | 0.2449 | benign | 0.273 | Stabilizing | 0.296 | N | 0.379 | neutral | None | None | None | None | I |
D/V | 0.188 | likely_benign | 0.2058 | benign | 0.184 | Stabilizing | 0.012 | N | 0.315 | neutral | N | 0.491346208 | None | None | I |
D/W | 0.8712 | likely_pathogenic | 0.8922 | pathogenic | -0.109 | Destabilizing | 0.998 | D | 0.436 | neutral | None | None | None | None | I |
D/Y | 0.2445 | likely_benign | 0.2744 | benign | 0.098 | Stabilizing | 0.991 | D | 0.342 | neutral | N | 0.485225484 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.