Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC872026383;26384;26385 chr2:178715028;178715027;178715026chr2:179579755;179579754;179579753
N2AB840325432;25433;25434 chr2:178715028;178715027;178715026chr2:179579755;179579754;179579753
N2A747622651;22652;22653 chr2:178715028;178715027;178715026chr2:179579755;179579754;179579753
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Ig-72
  • Domain position: 78
  • Structural Position: 162
  • Q(SASA): 1.0493
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/N rs980079508 0.565 0.008 N 0.269 0.198 0.288727942641 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.92E-06 0
D/N rs980079508 0.565 0.008 N 0.269 0.198 0.288727942641 gnomAD-4.0.0 2.05364E-06 None None None None I None 0 0 None 0 0 None 0 0 2.69958E-06 0 0
D/Y rs980079508 None 0.991 N 0.342 0.344 0.53371040847 gnomAD-4.0.0 2.73818E-06 None None None None I None 8.97076E-05 0 None 0 0 None 0 0 8.99858E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.1509 likely_benign 0.1728 benign 0.051 Stabilizing 0.227 N 0.371 neutral N 0.473701809 None None I
D/C 0.6493 likely_pathogenic 0.6869 pathogenic -0.058 Destabilizing 0.978 D 0.329 neutral None None None None I
D/E 0.1095 likely_benign 0.1116 benign -0.395 Destabilizing None N 0.19 neutral N 0.419365892 None None I
D/F 0.5595 ambiguous 0.6079 pathogenic -0.12 Destabilizing 0.98 D 0.343 neutral None None None None I
D/G 0.2078 likely_benign 0.2548 benign -0.041 Destabilizing 0.298 N 0.365 neutral N 0.467391912 None None I
D/H 0.2812 likely_benign 0.3259 benign 0.447 Stabilizing 0.931 D 0.343 neutral N 0.519090169 None None I
D/I 0.305 likely_benign 0.3293 benign 0.223 Stabilizing 0.772 D 0.363 neutral None None None None I
D/K 0.3605 ambiguous 0.4263 ambiguous 0.466 Stabilizing 0.772 D 0.375 neutral None None None None I
D/L 0.3503 ambiguous 0.393 ambiguous 0.223 Stabilizing 0.772 D 0.394 neutral None None None None I
D/M 0.5234 ambiguous 0.5598 ambiguous 0.068 Stabilizing 0.985 D 0.321 neutral None None None None I
D/N 0.1135 likely_benign 0.1238 benign 0.281 Stabilizing 0.008 N 0.269 neutral N 0.462004735 None None I
D/P 0.7046 likely_pathogenic 0.7504 pathogenic 0.184 Stabilizing 0.487 N 0.357 neutral None None None None I
D/Q 0.3061 likely_benign 0.3476 ambiguous 0.262 Stabilizing 0.559 D 0.287 neutral None None None None I
D/R 0.395 ambiguous 0.4659 ambiguous 0.634 Stabilizing 0.96 D 0.375 neutral None None None None I
D/S 0.1264 likely_benign 0.1416 benign 0.198 Stabilizing 0.03 N 0.157 neutral None None None None I
D/T 0.2176 likely_benign 0.2449 benign 0.273 Stabilizing 0.296 N 0.379 neutral None None None None I
D/V 0.188 likely_benign 0.2058 benign 0.184 Stabilizing 0.012 N 0.315 neutral N 0.491346208 None None I
D/W 0.8712 likely_pathogenic 0.8922 pathogenic -0.109 Destabilizing 0.998 D 0.436 neutral None None None None I
D/Y 0.2445 likely_benign 0.2744 benign 0.098 Stabilizing 0.991 D 0.342 neutral N 0.485225484 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.