Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8723 | 26392;26393;26394 | chr2:178715019;178715018;178715017 | chr2:179579746;179579745;179579744 |
N2AB | 8406 | 25441;25442;25443 | chr2:178715019;178715018;178715017 | chr2:179579746;179579745;179579744 |
N2A | 7479 | 22660;22661;22662 | chr2:178715019;178715018;178715017 | chr2:179579746;179579745;179579744 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1304915212 | None | 0.011 | D | 0.281 | 0.172 | 0.0846915920261 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/R | rs1304915212 | None | 0.011 | D | 0.281 | 0.172 | 0.0846915920261 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0771 | likely_benign | 0.0961 | benign | -0.496 | Destabilizing | 0.003 | N | 0.398 | neutral | None | None | None | None | I |
S/C | 0.1535 | likely_benign | 0.1857 | benign | -0.295 | Destabilizing | 0.818 | D | 0.557 | neutral | D | 0.544377322 | None | None | I |
S/D | 0.4379 | ambiguous | 0.5925 | pathogenic | -0.343 | Destabilizing | 0.181 | N | 0.443 | neutral | None | None | None | None | I |
S/E | 0.4649 | ambiguous | 0.5948 | pathogenic | -0.436 | Destabilizing | 0.237 | N | 0.425 | neutral | None | None | None | None | I |
S/F | 0.1375 | likely_benign | 0.1677 | benign | -1.046 | Destabilizing | 0.855 | D | 0.634 | neutral | None | None | None | None | I |
S/G | 0.1079 | likely_benign | 0.1283 | benign | -0.619 | Destabilizing | 0.001 | N | 0.145 | neutral | D | 0.525259109 | None | None | I |
S/H | 0.3327 | likely_benign | 0.4088 | ambiguous | -1.157 | Destabilizing | 0.985 | D | 0.544 | neutral | None | None | None | None | I |
S/I | 0.1387 | likely_benign | 0.173 | benign | -0.295 | Destabilizing | 0.523 | D | 0.63 | neutral | N | 0.50462364 | None | None | I |
S/K | 0.5779 | likely_pathogenic | 0.7248 | pathogenic | -0.649 | Destabilizing | 0.293 | N | 0.388 | neutral | None | None | None | None | I |
S/L | 0.0902 | likely_benign | 0.1062 | benign | -0.295 | Destabilizing | 0.293 | N | 0.58 | neutral | None | None | None | None | I |
S/M | 0.1552 | likely_benign | 0.1742 | benign | 0.146 | Stabilizing | 0.957 | D | 0.544 | neutral | None | None | None | None | I |
S/N | 0.1286 | likely_benign | 0.1527 | benign | -0.369 | Destabilizing | 0.019 | N | 0.468 | neutral | N | 0.492253376 | None | None | I |
S/P | 0.6871 | likely_pathogenic | 0.8358 | pathogenic | -0.334 | Destabilizing | 0.612 | D | 0.533 | neutral | None | None | None | None | I |
S/Q | 0.4328 | ambiguous | 0.5212 | ambiguous | -0.711 | Destabilizing | 0.744 | D | 0.481 | neutral | None | None | None | None | I |
S/R | 0.496 | ambiguous | 0.6566 | pathogenic | -0.343 | Destabilizing | 0.011 | N | 0.281 | neutral | D | 0.525978856 | None | None | I |
S/T | 0.0725 | likely_benign | 0.0748 | benign | -0.456 | Destabilizing | None | N | 0.19 | neutral | N | 0.485940388 | None | None | I |
S/V | 0.1425 | likely_benign | 0.1758 | benign | -0.334 | Destabilizing | 0.134 | N | 0.564 | neutral | None | None | None | None | I |
S/W | 0.2852 | likely_benign | 0.3698 | ambiguous | -1.014 | Destabilizing | 0.985 | D | 0.697 | prob.neutral | None | None | None | None | I |
S/Y | 0.1584 | likely_benign | 0.2039 | benign | -0.76 | Destabilizing | 0.855 | D | 0.635 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.