Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8725 | 26398;26399;26400 | chr2:178715013;178715012;178715011 | chr2:179579740;179579739;179579738 |
N2AB | 8408 | 25447;25448;25449 | chr2:178715013;178715012;178715011 | chr2:179579740;179579739;179579738 |
N2A | 7481 | 22666;22667;22668 | chr2:178715013;178715012;178715011 | chr2:179579740;179579739;179579738 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1342253967 | None | 0.381 | D | 0.559 | 0.291 | 0.524792858863 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 9.65E-05 | 1.30976E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
T/I | rs1342253967 | None | 0.381 | D | 0.559 | 0.291 | 0.524792858863 | gnomAD-4.0.0 | 1.54037E-05 | None | None | None | None | N | None | 6.7675E-05 | 3.39064E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.70911E-04 |
T/S | None | None | 0.001 | N | 0.195 | 0.123 | 0.281381271821 | gnomAD-4.0.0 | 1.59528E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86664E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0717 | likely_benign | 0.0818 | benign | -0.805 | Destabilizing | None | N | 0.249 | neutral | D | 0.522055904 | None | None | N |
T/C | 0.2909 | likely_benign | 0.3649 | ambiguous | -0.428 | Destabilizing | 0.99 | D | 0.607 | neutral | None | None | None | None | N |
T/D | 0.2548 | likely_benign | 0.3648 | ambiguous | -0.233 | Destabilizing | 0.551 | D | 0.581 | neutral | None | None | None | None | N |
T/E | 0.2513 | likely_benign | 0.3578 | ambiguous | -0.239 | Destabilizing | 0.538 | D | 0.551 | neutral | None | None | None | None | N |
T/F | 0.1048 | likely_benign | 0.1337 | benign | -0.833 | Destabilizing | 0.939 | D | 0.656 | neutral | None | None | None | None | N |
T/G | 0.1814 | likely_benign | 0.2307 | benign | -1.062 | Destabilizing | 0.594 | D | 0.555 | neutral | None | None | None | None | N |
T/H | 0.1675 | likely_benign | 0.208 | benign | -1.285 | Destabilizing | 0.978 | D | 0.657 | neutral | None | None | None | None | N |
T/I | 0.0777 | likely_benign | 0.0921 | benign | -0.212 | Destabilizing | 0.381 | N | 0.559 | neutral | D | 0.537102714 | None | None | N |
T/K | 0.1838 | likely_benign | 0.268 | benign | -0.813 | Destabilizing | 0.449 | N | 0.549 | neutral | None | None | None | None | N |
T/L | 0.0703 | likely_benign | 0.0814 | benign | -0.212 | Destabilizing | 0.005 | N | 0.374 | neutral | None | None | None | None | N |
T/M | 0.0777 | likely_benign | 0.0869 | benign | 0.043 | Stabilizing | 0.851 | D | 0.627 | neutral | None | None | None | None | N |
T/N | 0.0861 | likely_benign | 0.1008 | benign | -0.669 | Destabilizing | 0.317 | N | 0.518 | neutral | N | 0.516746084 | None | None | N |
T/P | 0.2566 | likely_benign | 0.3464 | ambiguous | -0.377 | Destabilizing | 0.652 | D | 0.624 | neutral | N | 0.51012105 | None | None | N |
T/Q | 0.2032 | likely_benign | 0.2594 | benign | -0.824 | Destabilizing | 0.728 | D | 0.625 | neutral | None | None | None | None | N |
T/R | 0.1395 | likely_benign | 0.2052 | benign | -0.541 | Destabilizing | 0.939 | D | 0.623 | neutral | None | None | None | None | N |
T/S | 0.0757 | likely_benign | 0.0877 | benign | -0.933 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.429895104 | None | None | N |
T/V | 0.0797 | likely_benign | 0.0901 | benign | -0.377 | Destabilizing | 0.368 | N | 0.513 | neutral | None | None | None | None | N |
T/W | 0.388 | ambiguous | 0.4937 | ambiguous | -0.778 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/Y | 0.153 | likely_benign | 0.186 | benign | -0.57 | Destabilizing | 0.99 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.