Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8732 | 26419;26420;26421 | chr2:178714992;178714991;178714990 | chr2:179579719;179579718;179579717 |
N2AB | 8415 | 25468;25469;25470 | chr2:178714992;178714991;178714990 | chr2:179579719;179579718;179579717 |
N2A | 7488 | 22687;22688;22689 | chr2:178714992;178714991;178714990 | chr2:179579719;179579718;179579717 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.967 | N | 0.656 | 0.467 | 0.594679051289 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2537 | likely_benign | 0.3699 | ambiguous | -1.28 | Destabilizing | 0.473 | N | 0.482 | neutral | None | None | None | None | I |
L/C | 0.4952 | ambiguous | 0.602 | pathogenic | -0.85 | Destabilizing | 0.993 | D | 0.557 | neutral | None | None | None | None | I |
L/D | 0.73 | likely_pathogenic | 0.8571 | pathogenic | -0.624 | Destabilizing | 0.927 | D | 0.652 | neutral | None | None | None | None | I |
L/E | 0.3597 | ambiguous | 0.5252 | ambiguous | -0.635 | Destabilizing | 0.699 | D | 0.651 | neutral | None | None | None | None | I |
L/F | 0.0982 | likely_benign | 0.1199 | benign | -0.807 | Destabilizing | 0.654 | D | 0.478 | neutral | N | 0.496246942 | None | None | I |
L/G | 0.5 | ambiguous | 0.6542 | pathogenic | -1.574 | Destabilizing | 0.863 | D | 0.663 | neutral | None | None | None | None | I |
L/H | 0.2543 | likely_benign | 0.3561 | ambiguous | -0.688 | Destabilizing | 0.938 | D | 0.641 | neutral | N | 0.478582536 | None | None | I |
L/I | 0.0934 | likely_benign | 0.1112 | benign | -0.565 | Destabilizing | 0.02 | N | 0.419 | neutral | N | 0.478503757 | None | None | I |
L/K | 0.2917 | likely_benign | 0.4048 | ambiguous | -0.907 | Destabilizing | 0.085 | N | 0.566 | neutral | None | None | None | None | I |
L/M | 0.1048 | likely_benign | 0.1112 | benign | -0.543 | Destabilizing | 0.015 | N | 0.308 | neutral | None | None | None | None | I |
L/N | 0.4622 | ambiguous | 0.595 | pathogenic | -0.729 | Destabilizing | 0.927 | D | 0.645 | neutral | None | None | None | None | I |
L/P | 0.2759 | likely_benign | 0.3788 | ambiguous | -0.771 | Destabilizing | 0.967 | D | 0.656 | neutral | N | 0.478329046 | None | None | I |
L/Q | 0.1531 | likely_benign | 0.22 | benign | -0.888 | Destabilizing | 0.133 | N | 0.366 | neutral | None | None | None | None | I |
L/R | 0.2153 | likely_benign | 0.3204 | benign | -0.322 | Destabilizing | 0.654 | D | 0.61 | neutral | N | 0.478329046 | None | None | I |
L/S | 0.2697 | likely_benign | 0.423 | ambiguous | -1.316 | Destabilizing | 0.863 | D | 0.567 | neutral | None | None | None | None | I |
L/T | 0.2498 | likely_benign | 0.3694 | ambiguous | -1.207 | Destabilizing | 0.654 | D | 0.527 | neutral | None | None | None | None | I |
L/V | 0.0945 | likely_benign | 0.1114 | benign | -0.771 | Destabilizing | 0.026 | N | 0.443 | neutral | N | 0.441792729 | None | None | I |
L/W | 0.1888 | likely_benign | 0.2551 | benign | -0.849 | Destabilizing | 0.995 | D | 0.634 | neutral | None | None | None | None | I |
L/Y | 0.3149 | likely_benign | 0.3795 | ambiguous | -0.637 | Destabilizing | 0.373 | N | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.