Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8737 | 26434;26435;26436 | chr2:178714565;178714564;178714563 | chr2:179579292;179579291;179579290 |
N2AB | 8420 | 25483;25484;25485 | chr2:178714565;178714564;178714563 | chr2:179579292;179579291;179579290 |
N2A | 7493 | 22702;22703;22704 | chr2:178714565;178714564;178714563 | chr2:179579292;179579291;179579290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs769711887 | -0.113 | None | N | 0.092 | 0.159 | 0.225902525712 | gnomAD-2.1.1 | 4.19E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.7E-05 | None | 0 | None | 0 | 0 | 0 |
R/K | rs769711887 | -0.113 | None | N | 0.092 | 0.159 | 0.225902525712 | gnomAD-4.0.0 | 6.9355E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08698E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1678 | likely_benign | 0.2182 | benign | -0.304 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
R/C | 0.1017 | likely_benign | 0.1361 | benign | -0.498 | Destabilizing | 0.141 | N | 0.273 | neutral | None | None | None | None | N |
R/D | 0.4291 | ambiguous | 0.5804 | pathogenic | -0.046 | Destabilizing | 0.009 | N | 0.27 | neutral | None | None | None | None | N |
R/E | 0.2312 | likely_benign | 0.3007 | benign | 0.083 | Stabilizing | 0.001 | N | 0.153 | neutral | None | None | None | None | N |
R/F | 0.239 | likely_benign | 0.319 | benign | -0.2 | Destabilizing | 0.009 | N | 0.399 | neutral | None | None | None | None | N |
R/G | 0.1282 | likely_benign | 0.2124 | benign | -0.588 | Destabilizing | 0.002 | N | 0.235 | neutral | N | 0.511825662 | None | None | N |
R/H | 0.0702 | likely_benign | 0.0781 | benign | -1.001 | Destabilizing | 0.033 | N | 0.265 | neutral | None | None | None | None | N |
R/I | 0.1133 | likely_benign | 0.1304 | benign | 0.443 | Stabilizing | 0.001 | N | 0.337 | neutral | N | 0.491759624 | None | None | N |
R/K | 0.0802 | likely_benign | 0.0854 | benign | -0.336 | Destabilizing | None | N | 0.092 | neutral | N | 0.509006462 | None | None | N |
R/L | 0.1132 | likely_benign | 0.1362 | benign | 0.443 | Stabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
R/M | 0.1355 | likely_benign | 0.1617 | benign | -0.163 | Destabilizing | 0.033 | N | 0.297 | neutral | None | None | None | None | N |
R/N | 0.2614 | likely_benign | 0.3378 | benign | -0.186 | Destabilizing | 0.005 | N | 0.203 | neutral | None | None | None | None | N |
R/P | 0.7079 | likely_pathogenic | 0.8479 | pathogenic | 0.216 | Stabilizing | 0.023 | N | 0.332 | neutral | None | None | None | None | N |
R/Q | 0.0796 | likely_benign | 0.0874 | benign | -0.196 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | N |
R/S | 0.1731 | likely_benign | 0.2505 | benign | -0.689 | Destabilizing | None | N | 0.13 | neutral | N | 0.463986248 | None | None | N |
R/T | 0.104 | likely_benign | 0.1261 | benign | -0.38 | Destabilizing | None | N | 0.159 | neutral | N | 0.483361443 | None | None | N |
R/V | 0.1483 | likely_benign | 0.1648 | benign | 0.216 | Stabilizing | 0.001 | N | 0.237 | neutral | None | None | None | None | N |
R/W | 0.1162 | likely_benign | 0.1546 | benign | -0.08 | Destabilizing | 0.738 | D | 0.266 | neutral | None | None | None | None | N |
R/Y | 0.1869 | likely_benign | 0.2521 | benign | 0.264 | Stabilizing | 0.018 | N | 0.391 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.